Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2199 ATGTTTCATTACCAGAAAAGCTTCTCCATTCTTCTTATACTCTTCATGATTTACTCAACAAAAGCCGAAAACAAAAGCACATGCCAGACAAAGTGTGGAGAAAATTCATTGAGTTATCCTTTTGGGTTTTCTGAAGGTTGCCAAATCCAATTACACTGTAGCCTCACCAATAACCAAATGCAAATTGGGGAGTTTTTCGTTCAGAACGTAACATCTAGCGGCATATTCATCCATATTCCTGCAAAATGCAACCGTACCTTGCAATCCATGGAGCCCCTTTTCACTTCCAAGTTTGCTCCTACTGGGAACAACAGCCTCCTTGTGCAAAATTGTACATCTGCGCTTGGTGGCTGTGTTATACCCACCTCAAGCTTTACGAGCAATCAGATAAAGTTGGATGGCTGCAATAATGGAAGTGATAATATAAGTTGCTTAGCGCGAAGCCAAGGCCAGGAAGCTTTTGATGTTATGAAATTCGAGGATGTGATCCAGAGTGGCTGCAAATACTTGTTCTCATCTTTTGCTATTGACCAGAGGGAAGAGGACCCAGAGGTTTCGCTTCAGTTTCAGATATTAGAGCTGGGATGGTGGCTTGAAGGCCCATGCCAATGCTCCCCTAATGCCACCTGTACAAATGTTACTGTCGCCGCCGGAAAGTTCGGGTTCCGGTGTCAATGTCCTCGAGGTTATCACGGAGATGGGTTCTTGAATGGCACCGGTTGCCGGAGATCAGGATGGGAAGGAGAAACTAAAGTCGGGATTCTCATTGGAGGGATCATTGCTGGAGCTTTGATAGTGGCAATTCTGTGTCTCCTTGGTTATTATGTACGACGTCGTTCCTATTGTTTGAAGAAGCAACTGACTGCAAGGCGCCTATTGCGTGAAGCTGCAGGCAACTCTACCGTTCCTTTCTATCCTTACAAAGAAATAGAGAGAGCCACTAATTTTTTCTCAGAGAAACAGAGGCTTGGAACTGGGGCTTTTGGTACAGTTTATTCAGGAAAACTCCATAATGATGATTTGGTTGCCATAAAGAAAATAAGACAGAGAGACCCCAATAGTGTTGACCAAGTCTTGAATGAAATCAAGCTCCTTTCTTCTGTGAGTCACCAAAATTTAGTTCGTCTTCTGGGTTGCTGCATTGAGGAGGATGAACAGATACTTGTTTATGAGTTTATGCCCAATGGACCTTTGTCTCAGCATTTACAGAGAGAGAATGGTAAAGGACTTCCATGGGCAATTCGGCTCACTATCGCATCTGAAACTGCTAATGCCATAGCTTATCTGCATTCTGCCATTGATCCTCCAATCTATCACAGAGACATAAAATCCAGCAATATTTTGCTGGATTACAACTTCAACTCAAAAGTTGCAGACTTTGGGCTTTCAAGGCTTGGCATGACCGAAATATCACACATCTCAACCGCCCCACAAGGGACACCAGGCTACGTGGATCCTCAATATCACCAGAACTACCATCTTTCTGATAAAAGCGATGTTTACAGTTTCGGAGTTGTTTTAATAGAGATAATAACAGCCCTCAAAGTGGTTGATTTTGGTCGACCTCATGATGAGGTTAATTTGGCAGCACTAGCAGTTGATAGAATCAGCAGGGGCTGTGTGGACGAGATCATTGATCCCTTCTTAGAGCCACACAGAGATGCTTGGACACTCTATTCTATTCACAAAGTGGCTGAACTTGCATTCAGATGCTTAGCTTTTCATAGCGACATGAGGCCTACTATGATGGAAGTGGCAGAGGAGCTAGACCACATCAGACGCAGTGGATGGGCAATAATGGAGGGAACCATAGCATCATCGGTCGGGTCGGCACGTTCATCGTTACCAAATGAAGCTGAGAAATTCTTTAGTGATGTTCAACTTGATAAAGAACAAGTAGAGAGTGAGATTTTGATTGTTTCAGAGAGGGCAGAGGTGAGGAATAGCTCCCCTGTATCAGTGCATGATACTTGGTCAAGTGGACGTAGCTCGCCTTCAAGCAATAGCTTGTTGGGAAATCCACCTCAATGA 2031 0.4397 MFHYQKSFSILLILFMIYSTKAENKSTCQTKCGENSLSYPFGFSEGCQIQLHCSLTNNQMQIGEFFVQNVTSSGIFIHIPAKCNRTLQSMEPLFTSKFAPTGNNSLLVQNCTSALGGCVIPTSSFTSNQIKLDGCNNGSDNISCLARSQGQEAFDVMKFEDVIQSGCKYLFSSFAIDQREEDPEVSLQFQILELGWWLEGPCQCSPNATCTNVTVAAGKFGFRCQCPRGYHGDGFLNGTGCRRSGWEGETKVGILIGGIIAGALIVAILCLLGYYVRRRSYCLKKQLTARRLLREAAGNSTVPFYPYKEIERATNFFSEKQRLGTGAFGTVYSGKLHNDDLVAIKKIRQRDPNSVDQVLNEIKLLSSVSHQNLVRLLGCCIEEDEQILVYEFMPNGPLSQHLQRENGKGLPWAIRLTIASETANAIAYLHSAIDPPIYHRDIKSSNILLDYNFNSKVADFGLSRLGMTEISHISTAPQGTPGYVDPQYHQNYHLSDKSDVYSFGVVLIEIITALKVVDFGRPHDEVNLAALAVDRISRGCVDEIIDPFLEPHRDAWTLYSIHKVAELAFRCLAFHSDMRPTMMEVAEELDHIRRSGWAIMEGTIASSVGSARSSLPNEAEKFFSDVQLDKEQVESEILIVSERAEVRNSSPVSVHDTWSSGRSSPSSNSLLGNPPQ 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2199 676 Gene3D Transferase(Phosphotransferase) domain 1 393 601 - -
Acco11g2199 676 SUPERFAMILY Protein kinase-like (PK-like) 299 589 IPR011009 -
Acco11g2199 676 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 9 663 IPR044652 GO:0004672
Acco11g2199 676 CDD EGF_CA 204 233 - -
Acco11g2199 676 FunFam Wall-associated receptor kinase-like 14 284 392 - -
Acco11g2199 676 Gene3D Laminin 202 237 - -
Acco11g2199 676 FunFam Wall-associated receptor kinase-like 20 393 601 - -
Acco11g2199 676 Pfam Protein kinase domain 317 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g2199 676 CDD STKc_IRAK 323 592 - -
Acco11g2199 676 Gene3D Phosphorylase Kinase; domain 1 278 392 - -
Acco11g2199 676 MobiDBLite consensus disorder prediction 646 676 - -
Acco11g2199 676 ProSitePatterns Protein kinases ATP-binding region signature. 323 346 IPR017441 GO:0005524
Acco11g2199 676 ProSiteProfiles Protein kinase domain profile. 317 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g2199 676 SMART serkin_6 317 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g2199 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2199 Acco-ChrAcco11 35760982 35764106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2199 28 676 Receptor kinase-like Gene Family AT2G23450 55.556 0.0 715
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Acco11g2199 Pkinase 7e-45 CL0016