LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco11g2188	ATGACTATTTGGCTCGCGGGTGTTTTGCCTCCGAGGTCGGAATTCTCCTCACTAGGGTTTAAAGGGGTTTTCTTAGTTTCGATTTCAAATCTTGAAGAAGAACCTCCTGCGAACAAGATACGACCCCTTCTGAAAGTTGATAACACAATGTCATTTTCTCTGTTCTCCACGCCACAGCAACAATCGCTCTTTCAGCCCCAGCAGCAGCAGCATAGCAGTTTGTTCCTTCCGCTGCAGCAGCAGCAGCAGCCGCAATTGCAACTTCAACCGCAGCCGCAGCCGCAGCCGCAGCAGCAACTGTTTCTTTTCACTACCGATAAAACTCCCGCTAATTATAGTACCAAGTGGGCAGATCTTCATCCTGATTCTCAGAAGGTTCTCCTTCAGATCGAGGAGCGGATATTGGAGTATAGGGATGAGAGCCAGAGACTGGATCAGTGTGGTCGTCTCTATGATTCTTCAATTTCAAACGAAGGGTTTGAGCTTGATTCAAGCCACATTGTTCAGGAACTTGGGGGAATCAGCACTGCCATGGAACGACAGAAAATTTTGTTGCAGGAATTGATGTTTGTCATTAAGGATATGTTACGCAACACAGAGGTTGCTATTCGTTCTTTTATGATGTTACGTCCAAGGTTCCTTCATCCTAGTGGAGGGGGCGCTTCAAGCGCCACAGTTCCTTTGCAGACCCCTGGAACCCCTGCAACATCTAGTTCAAGTAGCCAACCAACAACTACAACGATTATGCCTGTTTTTGATTTTTATTATGGGCTTCCAAAGAAACCATCGCCATTTTTACAGCAATCAGTCTTAAGATTTGAGAAGTATCTGGGTGAATGCCGTCAATGGATTGAAGAGTTGGAGCAGCTGCTTCTCTTAGACTCTGAGAAAAGCGGTTCTAATAACAGATCCTCATTATTGGAATCTCTTCCCAAAGTCTTGACAAATGTGCATGACTTTTTTGTTCATGTGGCTGCAAAGGCGGAAAGCATTCATCAGTACATTGAATCTATGAAATCAGCTTACCTAGCTGATCAGCGTCGTTGTGGAGAGGTGAATGATCCGTTTCTAGAGGCTGATCGGCGAGAAACAGCAAGACAAGAAGCAGCCTCAAAAAGAGTTCATCCAACACTACATTTGCCTGCAAATACACAACCATCAACACAAGTTGCTGGTTTGTTTTCCAGCTCAGGAACTCAAGGGACGTTGACTGCTTCACAGACATCTGCAACAACCATGTCATCTTCATCAGGAAGTGGCCTTTCACTTTTTAGCACACCATCTTCTGTTCCACCTTCCTCTATGCCATCTATGTTTACAACACCAACGACTTCTGCTCCAGCACCCTCTTTGTTCGGTTCCTCTAGCGCTACACCCCAACCATCAGCTTTTGGTTCTTCATCTTCCTTATTTGCTCCTTCTTCTCCCTCTCTTTTCAGTAGTTCCGCTTCACCATTTGGTGCAAGTACTGGAGGTTCACTCTTTTCGACTCCATTTGCTTCAGGTGCTGCAATAGGATCAGGGGCAAGCTTTGGGGCTGCATCGAAATCATCAAGGCCAAAAGCCAGAACTGCTCGTCGATGA	1584	0.4583	MTIWLAGVLPPRSEFSSLGFKGVFLVSISNLEEEPPANKIRPLLKVDNTMSFSLFSTPQQQSLFQPQQQQHSSLFLPLQQQQQPQLQLQPQPQPQPQQQLFLFTTDKTPANYSTKWADLHPDSQKVLLQIEERILEYRDESQRLDQCGRLYDSSISNEGFELDSSHIVQELGGISTAMERQKILLQELMFVIKDMLRNTEVAIRSFMMLRPRFLHPSGGGASSATVPLQTPGTPATSSSSSQPTTTTIMPVFDFYYGLPKKPSPFLQQSVLRFEKYLGECRQWIEELEQLLLLDSEKSGSNNRSSLLESLPKVLTNVHDFFVHVAAKAESIHQYIESMKSAYLADQRRCGEVNDPFLEADRRETARQEAASKRVHPTLHLPANTQPSTQVAGLFSSSGTQGTLTASQTSATTMSSSSGSGLSLFSTPSSVPPSSMPSMFTTPTTSAPAPSLFGSSSATPQPSAFGSSSSLFAPSSPSLFSSSASPFGASTGGSLFSTPFASGAAIGSGASFGAASKSSRPKARTARR	527

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco11g2188	527	MobiDBLite	consensus disorder prediction	508	527	-	-
	Acco11g2188	527	Gene3D	-	261	351	-	-
	Acco11g2188	527	PANTHER	NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1	49	515	IPR024882	GO:0005643\|GO:0006913\|GO:0008139\|GO:0017056
	Acco11g2188	527	MobiDBLite	consensus disorder prediction	378	485	-	-
	Acco11g2188	527	MobiDBLite	consensus disorder prediction	361	485	-	-
	Acco11g2188	527	MobiDBLite	consensus disorder prediction	220	244	-	-
	Acco11g2188	527	MobiDBLite	consensus disorder prediction	222	244	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco11g2188	Acco-ChrAcco11	35675863	35680282	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco11g2188	100	527	NAC Transcription Factor Family	AT4G37130	64.055	0.0	523