Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2128 ATGGACTGGGATCGAGGATCGTCTCTTGGTACCGGAACCTTTGCTTCCGTTCACTTGGCCATTCCCAGACTTACTTCTGCTCGATTTTCATCCCCTGCCGCCGTCAAGTCCGCTGGCCTCTTCGCTTCTTCTTCCCTCCGGAACGAACAATTCGTACTCAATCGCCTTGGACTATGCCCCCAAATTATCAGGTGTTTCGGCCATGATTCTACCTTCGAAAACGGTGTCCACTATTATAATTTGTTCCTGGAATACGCTGCTGCCGGTAGTCTCGCTGATCAGCTCAAAATTCGTGGCGGTCGCGTGCCGGAATCCGATGTCCGCCGATACACCAGGTCCATCGTCCAGGGACTCAGACATATTCACGCCAATGGCTTCGTCCACTGTGATATAAAGCTTCCCAACATTCTCCTCTTTGCCAATGGCGACGTCAAGATTGCCGATTTTGGACTCGCCAAGAAGTCAGGGGAACAACAGAGCAACCAAGAGACCAAGTATGAGATCAGGGGAACTCCTGCGTGTATGTCCCCGGAATCAGTAAATGACAGTCAATACGAATCTCCGGCTGATATATGGGCTCTGGGATGTGCTGTGGTGGAGATGCTCACCGGAAAACCCGCCTGGGATTTCAAGGATGAATCCAATATTTTCTCGCTGTTGATGCGGATCGGGTCAGGAGAAGAAATACCCGAAATCCCCAATGATATGTCAGAAGATGGGAAGGATTTCCTGAGAAGATGTCTTGTGAAAGATCCTAGAAAAAGATGGACGGCGGAGAAGCTCTTGGAGCATCCCTTTGTCGCCGACACAACTGTTTCATTAGAGCGTGTGAAAGAACCGTTGACGTCGCCGACAAGTCACTTCGATTTTCTAGACTGGGTTTCCAATACAACAACTTCAGCCCTGAATTCACCGGAATCTGATGATTGGTGTGAGTGGAAATTTGAATCGCCGTGCTTATCCAGCACCTGTTCGCCGGAGGATAGGCTCCGGAATTTGGTGACGGCTGAGACGCCAAATTGGTTGGAATCTGACAGTTGGGTCAGTGTTAGATGCGAATAG 1062 0.4991 MDWDRGSSLGTGTFASVHLAIPRLTSARFSSPAAVKSAGLFASSSLRNEQFVLNRLGLCPQIIRCFGHDSTFENGVHYYNLFLEYAAAGSLADQLKIRGGRVPESDVRRYTRSIVQGLRHIHANGFVHCDIKLPNILLFANGDVKIADFGLAKKSGEQQSNQETKYEIRGTPACMSPESVNDSQYESPADIWALGCAVVEMLTGKPAWDFKDESNIFSLLMRIGSGEEIPEIPNDMSEDGKDFLRRCLVKDPRKRWTAEKLLEHPFVADTTVSLERVKEPLTSPTSHFDFLDWVSNTTTSALNSPESDDWCEWKFESPCLSSTCSPEDRLRNLVTAETPNWLESDSWVSVRCE 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2128 353 CDD STKc_MAPKKK 2 267 - -
Acco11g2128 353 SUPERFAMILY Protein kinase-like (PK-like) 3 305 IPR011009 -
Acco11g2128 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Acco11g2128 353 Gene3D Transferase(Phosphotransferase) domain 1 2 307 - -
Acco11g2128 353 SMART serkin_6 3 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g2128 353 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 309 - -
Acco11g2128 353 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Acco11g2128 353 Pfam Protein kinase domain 5 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g2128 353 ProSiteProfiles Protein kinase domain profile. 3 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2128 Acco-ChrAcco11 35287262 35288323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2128 1 351 MAP Kinase Kinase Kinase AT4G36950 50.986 8.17e-117 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Acco11g2128 Pkinase 1.4e-54 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g2128 11 35287262 35288323 Acco12g1959 12 31053874 31054938 CCT
Acco11g2128 11 35287262 35288323 Acco11g2128 11 35287262 35288323 ECH