Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2125 ATGCTTGATCCTTCCTCTCCCGCCATGAACGACCAGCTCTCCAGACCCACTTCAATCTTTGGACTCCGATTGTGGGTTGTGCTCGGGGTGTGTGTCGGAGCCGCCATCGTGCTGCTTCTCTTCCTCATATCTATCTGGCTAGTTTCCAAGCGCTCCAAGACTAATCCCACTCACAGACCATCAATCCCAGTCGTCTCCAAAGAGATCCACGAGATTAGAATCGACCATCATCACGATTCCAAGCTAAAAGGAACCCGTATCCTATCCGACCCGTCTCCCGAGCTCGAGCCGCTTCCCGGAATTGAACGCCAGGCTCTGCTCCCAGCATCGGAAGAAGAAAATCCATCGGGGATCAACCGAATTCAATTTGAGATTGGGAAGAATCATAGAATTTCGTTCCCTGAACGTGCTCTGGCTCGGTCGTCTTCGCACGGAAGTGGGGAGGTACGGCCCGTCGATCAGATACCTACGGTGATTCCCGAAGTGTCGCATTTGGGTTGGGGTCACTGGTATACTCTGAGAGAGCTCGAAGATGCGACGAATGGGTTCGCCGACGAGAACGTAATCGGGGAAGGCGGCTACGGGATTGTTTACCATGGTATTCTGAAGGACAATACTAATGTTGCCGTTAAGAATTTGCTCAATAATAGGGGACAAGCTGAGAAAGAGTTCAAGGTCGAAGTGGAAGCTATAGGACGAGTCCGGCACAAGAGTTTAGTAAGGTTGCTGGGATATTGTGCTGAAGGAGCTCATAGAATGCTCGTATATGAGTACGTTGACAATGGGAACTTGGAGCAGTGGCTGCATGGGGATGTTGGGCCTTGCAGTCCTCTGAATTGGGAAATTCGAATGAACATTATTCTGGGAACAGCAAAAGGGCTAGCTTATCTTCACGAGGGGTTGGAACCAAAAGTTGTTCACCGTGATCTTAAATCAAGCAACATTCTGATCGACAAACAATGGAATTCAAAGGTGTCCGACTTTGGGCTTGCAAAACTCCTTGGCTCTGATAGCAGCTACATTACCACACGCGTCATGGGCACATTCGGATATGTAGCTCCCGAATATGCTAGTACTGGAATGTTAAATGAAAGAAGTGATGTGTACAGTTTCGGAATTCTTATTATGGAAATAATTACAGGAAGGAATCCAGTTGATTACAGTCGGCCTCCAGAAGAGGTCAATTTAGTTGACTGGCTCAAGAAGATGGTTAGTGACAGGAATGCAGAGGGAGTGTTGGATCCCAAGCTCCCTGAGAAACCAAGTTCAAGGGCACTCAAGCGAGCCCTTCTTGTAGCTTTGCGTTGCACTGATCCTAACGCACAAAAGCGACCTAAAATGGGGCATATCATACACATGCTCGAAGCTGAAGATTCTTCTCACAAAGAGGATCGGAGAGCGAAAAGGGATGCGGAAAATTCAGCTAATGATGAGGATAGATCAAAAGGGGGGGCAACTGTGTCAGGTGATGATGGTAAAGTTTGA 1485 0.4815 MLDPSSPAMNDQLSRPTSIFGLRLWVVLGVCVGAAIVLLLFLISIWLVSKRSKTNPTHRPSIPVVSKEIHEIRIDHHHDSKLKGTRILSDPSPELEPLPGIERQALLPASEEENPSGINRIQFEIGKNHRISFPERALARSSSHGSGEVRPVDQIPTVIPEVSHLGWGHWYTLRELEDATNGFADENVIGEGGYGIVYHGILKDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKSLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPCSPLNWEIRMNIILGTAKGLAYLHEGLEPKVVHRDLKSSNILIDKQWNSKVSDFGLAKLLGSDSSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIITGRNPVDYSRPPEEVNLVDWLKKMVSDRNAEGVLDPKLPEKPSSRALKRALLVALRCTDPNAQKRPKMGHIIHMLEAEDSSHKEDRRAKRDAENSANDEDRSKGGATVSGDDGKV 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2125 494 Gene3D Phosphorylase Kinase; domain 1 163 258 - -
Acco11g2125 494 SUPERFAMILY Protein kinase-like (PK-like) 159 455 IPR011009 -
Acco11g2125 494 ProSitePatterns Protein kinases ATP-binding region signature. 189 211 IPR017441 GO:0005524
Acco11g2125 494 CDD STKc_IRAK 189 455 - -
Acco11g2125 494 Gene3D Transferase(Phosphotransferase) domain 1 259 483 - -
Acco11g2125 494 FunFam Probable serine/threonine-protein kinase At1g01540 163 258 - -
Acco11g2125 494 Pfam Protein kinase domain 184 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g2125 494 SMART serkin_6 183 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g2125 494 ProSiteProfiles Protein kinase domain profile. 183 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g2125 494 MobiDBLite consensus disorder prediction 454 494 - -
Acco11g2125 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
Acco11g2125 494 Coils Coil 203 223 - -
Acco11g2125 494 FunFam Putative receptor-like serine/threonine-protein kinase 259 469 - -
Acco11g2125 494 PANTHER OS01G0323000 PROTEIN 8 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2125 Acco-ChrAcco11 35254728 35257454 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2125 164 455 Receptor kinase-like Gene Family AT4G02010 45.270 2.32e-87 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Acco11g2125 Pkinase 5.6e-47 CL0016