Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2119 ATGATGAACCATCAAGGTCAAAACAATGAAAGCATCCAAAGTGAGGCCAACCATTCGGAATCAACTGAAGCCCCGGGAGTTGTGTCTTCACCAAGTTCTTGTAATGGAAGCATTCAAAGTTTCCCAAATAGTCTTAATGGGCTAAATTTTCTCCCTTATCAAGAGCATCTTAATAGTCTTCAAAGCAATGATCATGGTGCGGGTGTTATCCATCATAACCAAGACTTAAATGCCGAATATGTGGAAAATGGTCATCACTCCAATCAGAATGTGTCAGTAGGTTTGTGCCTACATCCATTTGAACCTGACGCACCAGACAATCAGAGTGACAGTAATTTATCTGGTTTATTGGCAAGTGCCAATGGAACATCTTGTGTAGTAGATGAACAAGGAGTGGATAACAGCTTAGTGAATATGAGTTCTTTGTCCTCCAATAGTTCTCCTGAACATGTTTCTAGAGAATTGTTAACAGGTGAAAGTTCCAGATCAGCTGTGCAAGTTAGGATCCCCATATCTGCTGCTGTCCAAGTCAATACCAGTAACAGCTCGAGCGTAGCAGCTCCTTATATTGGTGCTACAAATATCCGCCCACAACAGTCTGATGATGAATTTGGTCATCGGACTATAATGCCAGTTTCTAACATGCAACAATTAAATGAAGCTAGGCATCGTCCTGCTAATGGTTCTCTATTTTCATTAGAGGCTGGAAGTGATCATGGTATTACCAGGCCAAGTTATGACATGCTACACTTCAGTCACGCTGGACAACTTGGACAATTTCAAAGCAATAATCAGACAGATGCAAGTCCAGCAACTTTTGTACCACCTAGCAATTTGTCAATGGGGCAAGCAAGTAACTTTTATGCTCCTTTTCCGAGGCAAACACCCCAGCATCACCAAGAAAGTCATCCTCATTTCTTTAGCCAAGCACAAGCTTCAGTTGGTGCAATTCCTTATGGGCAACCATTTGTGCAGTTTCCTGATTTTCATGATATCCTGCTGCCTGCCCCTTGGGTTAATGTTATGGGGCTGACGAGTTTCGCAACTCCCTTTTCACCTGTTTATGCTGTGCCAGGAGGCAGAAACCCTGACAACATTCCAAGAAATATCATACTCGGTTCTCAAACTGGACCTCAGTCAACTTATCCGGCAAATTGGAATTTTGACCATGGAACTGCAAACTTTCTTGGAAATTTTGCTTTCCCTTCCCATTATGGTCCGTTTTTAGGTAGTCATTTATTGATTGCTCCAACCGATGTCCATTGGTTCAATGCTTTCGAACAGCATATGCCAACGTTATTTGGAGTTGTCTCTGCAGCTGCACCTATTGGTTTCCCGGGGCCAAGTAGAAATAACCAATTAGATTTAAACCCTCCAGCAATCTCTCAAGAAAGGGACTTGCCTACTGTAATTAATAGTGCTGGGGTTCAGAATCAGCTCAGGGCGTCACAAAGATCGGAGAATCAATCTTTTCTTAATATGGGACCTCCTGTTGCTGATGGAGCTAGAAACAATTTGTCAAGTGAGGTGACTAGGCAACTTGTACCTGGATTGAGTGAAGAAGATATTATGGCACACCTTAGGCTTGAAAAGTTCCAATCGCCCCCAGCGGTAACTCCAGAAAATGTTGATTGCTGTTGCATATGTCAGGAAAACCATGCTGATGGGGAGGACATTGGGGTGTTAGATTGCGGGCACAAGTTTCACTGTGACTGTGTCAAAAAATGGCTGCGCGTCAAGAACTCCTGCCCCATCTGCGTACGGACAGGACTAGCTGTGTGA 1782 0.4338 MMNHQGQNNESIQSEANHSESTEAPGVVSSPSSCNGSIQSFPNSLNGLNFLPYQEHLNSLQSNDHGAGVIHHNQDLNAEYVENGHHSNQNVSVGLCLHPFEPDAPDNQSDSNLSGLLASANGTSCVVDEQGVDNSLVNMSSLSSNSSPEHVSRELLTGESSRSAVQVRIPISAAVQVNTSNSSSVAAPYIGATNIRPQQSDDEFGHRTIMPVSNMQQLNEARHRPANGSLFSLEAGSDHGITRPSYDMLHFSHAGQLGQFQSNNQTDASPATFVPPSNLSMGQASNFYAPFPRQTPQHHQESHPHFFSQAQASVGAIPYGQPFVQFPDFHDILLPAPWVNVMGLTSFATPFSPVYAVPGGRNPDNIPRNIILGSQTGPQSTYPANWNFDHGTANFLGNFAFPSHYGPFLGSHLLIAPTDVHWFNAFEQHMPTLFGVVSAAAPIGFPGPSRNNQLDLNPPAISQERDLPTVINSAGVQNQLRASQRSENQSFLNMGPPVADGARNNLSSEVTRQLVPGLSEEDIMAHLRLEKFQSPPAVTPENVDCCCICQENHADGEDIGVLDCGHKFHCDCVKKWLRVKNSCPICVRTGLAV 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2119 593 MobiDBLite consensus disorder prediction 137 159 - -
Acco11g2119 593 Pfam Ring finger domain 545 586 IPR001841 -
Acco11g2119 593 ProSiteProfiles Zinc finger RING-type profile. 546 586 IPR001841 -
Acco11g2119 593 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 30 590 IPR045191 GO:0061630
Acco11g2119 593 SUPERFAMILY RING/U-box 545 587 - -
Acco11g2119 593 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 509 590 IPR013083 -
Acco11g2119 593 SMART ring_2 546 586 IPR001841 -
Acco11g2119 593 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2119 Acco-ChrAcco11 35207345 35211901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2119 517 593 C3H Transcription Factor Family AT2G15530 45.000 2.38e-18 87.0