Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2098 ATGCCTCCTCCTCAAACACCCTTCCTTGTCCTCTTCTTCTTCTCCCTCCTCCCATTTTCCTCTTCCGGCGCCGCCTCCTCCACCATCGACTTGCTCCTCCCTGCCGACGCCGTTTCCCTTATCTCCTTCAAATCTAAAGCCGACCCTGGCAACAAGCTCCTTTATGCCCTCAACGAGCGCTACGACTATTGCCAATGGCAGGGCGTCAAATGCGCCCAAGGAAGAGTCGTTCGCTTCGTCCTTCAGAGCTTCGGCCTCCGTGGCGTCTTCCCTCCCGACACCTTGTCTCGTCTCGACCAGCTTCGAGTTCTCAGTCTTCGCAACAATTCCCTCTCTGGTCCCATTCCCGATCTCTCCTCTCTGCTCAATCTCAAATCCCTCTTTCTCGACCATAATTCCTTCTCTGGTTCTTTCCCCCCTTCCATTCTCTTCCTCCATCGCCTTCTCTCTCTTTCTCTCTCCCACAACAACCTCACCGGCTCTATCCCTGCCGGTTTAACTCTCCTGGACCGATTGATTTCTCTTCGCCTCGATTCCAACTGGTTTAACGGAACCATTCCTCCCTTGAACCAGTCCTCGCTTCAAATCTTCAATGTGTCCGGAAACAAGTTGACTGGCCCGGTTCCCATGACTCCTACACTCAGTCGTTTTTCCCCGGCGTCGTTTTCCGGGAACCAGGGTCTCTGCGGGGAGATCATTCACTTGGCATGTAATTCTCGGTCTCCGTTCTTCGGTCCCTCTAATGCCTCGACCTCCGCCGCGCCACTTGGGCAAAGCGCGGAATCGCAGGGAATCGTGGTCGTTCCTTCACATTCATCTACTGAAGAGAAGCATAAGAACACTGCCTTGATTCTAGGATTTACCATTGGGTTCTCGGTGCTCGTTGCATCCATCCTGTTTGCAATTGCATTGTTTAGGAAACGAAGCAGTTATAGAAGACCAGAGAGCCCCAAAATACAGGAGTCTTTGGAAACCAAAGAAGTAAATGCGCCGCCTCGTTCATCTCTAGCTGTCGAAACAGAAATAGAGCAAAATAGGGAATGGAGTGAGAAGGAAAAGAAGATAGAGAAAATAAGAGAAGCACATAAGAGTGGGAATTTGGTGTTCTGCTGCGGGGAGCCACAGTTATGTACAATAGAGCAGTTGATGAGAGCTTCGGCGGAGTTGCTGGGTAGGGGTAACATAGGAACAACGTACAAGGCGGTGTTAGATGTTCATCTCATAATGACAGTGAAGAGGCTGGATGCTGTTAAAACATCAATAACGAGTAGCCCAGAATTCGAGCATCACATGGAAATGGTGGGTGAGCTTCGGCATCCAAATTTGGTGCCCGTTAGAGCTTATTTCCAGGCAAAGGGAGAGAGGCTGGTGATCTATGATTATCAACCTAATGGCAGCCTCTTTAACCTAATACATGGTTCGAAATCAACGAGAGCGAAGCCTCTTCACTGGACTTCATGCTTAAAGATTGCTGAAGATGTCGCCCATGGAGTCGCCTATATACATCAAGCCTCGAGATTAATCCATGGCAACCTGAAGTCGACTAATGTCCTTCTTGGCGTGGACTTTGAAGCCTGTGTCACAGACTATGGCTTGGCCCTCCTTGCAAATTTTTCATCAACTGAAGACCCTGGCTCTGCAGCTCATACAGCACCTGAGACTCGCAACTCTAGCCGCCGAGCCACTCCCAAGTCCGACGTATATGCCTTTGGGGTGCTTCTATTAGAGCTTCTTACGGGTAAACATCCTTCTCAACATCCTTTCCTTGCGCCCGCGGATATGCAACATTGGGTTAGAGCAATGAGGGATGACGATGGTGCTGATGAACATAATGGGCTTGGAATGCTCACAGAAGTCGCTAGTATTTGCAGTGCAACGTCGCCTGAGCAGAGGCCGGCAATGTGGCAAGTCTTGAAGATGATACAGGAGATAAAGGACAGTGTAACGATGGAGGATACAACTGCTACAAGAGACTGTGAACTCTGA 1986 0.499 MPPPQTPFLVLFFFSLLPFSSSGAASSTIDLLLPADAVSLISFKSKADPGNKLLYALNERYDYCQWQGVKCAQGRVVRFVLQSFGLRGVFPPDTLSRLDQLRVLSLRNNSLSGPIPDLSSLLNLKSLFLDHNSFSGSFPPSILFLHRLLSLSLSHNNLTGSIPAGLTLLDRLISLRLDSNWFNGTIPPLNQSSLQIFNVSGNKLTGPVPMTPTLSRFSPASFSGNQGLCGEIIHLACNSRSPFFGPSNASTSAAPLGQSAESQGIVVVPSHSSTEEKHKNTALILGFTIGFSVLVASILFAIALFRKRSSYRRPESPKIQESLETKEVNAPPRSSLAVETEIEQNREWSEKEKKIEKIREAHKSGNLVFCCGEPQLCTIEQLMRASAELLGRGNIGTTYKAVLDVHLIMTVKRLDAVKTSITSSPEFEHHMEMVGELRHPNLVPVRAYFQAKGERLVIYDYQPNGSLFNLIHGSKSTRAKPLHWTSCLKIAEDVAHGVAYIHQASRLIHGNLKSTNVLLGVDFEACVTDYGLALLANFSSTEDPGSAAHTAPETRNSSRRATPKSDVYAFGVLLLELLTGKHPSQHPFLAPADMQHWVRAMRDDDGADEHNGLGMLTEVASICSATSPEQRPAMWQVLKMIQEIKDSVTMEDTTATRDCEL 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2098 661 Gene3D Transferase(Phosphotransferase) domain 1 463 660 - -
Acco11g2098 661 MobiDBLite consensus disorder prediction 541 561 - -
Acco11g2098 661 FunFam Leucine-rich repeat receptor-like protein kinase 147 239 - -
Acco11g2098 661 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 647 IPR046959 -
Acco11g2098 661 Gene3D Phosphorylase Kinase; domain 1 351 461 - -
Acco11g2098 661 Gene3D Ribonuclease Inhibitor 35 190 IPR032675 -
Acco11g2098 661 Gene3D Ribonuclease Inhibitor 191 239 IPR032675 -
Acco11g2098 661 ProSiteProfiles Leucine-rich repeat profile. 100 122 IPR001611 GO:0005515
Acco11g2098 661 MobiDBLite consensus disorder prediction 315 336 - -
Acco11g2098 661 ProSiteProfiles Protein kinase domain profile. 384 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g2098 661 SUPERFAMILY L domain-like 41 230 - -
Acco11g2098 661 Pfam Protein kinase domain 387 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g2098 661 SUPERFAMILY Protein kinase-like (PK-like) 388 646 IPR011009 -
Acco11g2098 661 FunFam Probable inactive receptor kinase At5g67200 35 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2098 Acco-ChrAcco11 34998905 35001629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2098 20 652 Receptor kinase-like Gene Family AT3G50230 54.587 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco11g2098 Pkinase 7.9e-30 CL0016