Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2095 ATGGCCGTGGAGCTCATGGTGGGTTACAGGAACGATAGCTTCGCGGCCAAAATGGATGATAATGTTGTTCAGGAAGCTGCCTCTGGCCTCGAGAGCGTCGAGAAACTCATCAGGTTACTTTCTCAGACTCAACAACAATTCCACTCTTCTTCTTCTTCTTCCGCTTCTAAGTCTTCCCTCGATATCGAGATGGACTGCAAAGCCGTCGCCGACGTTGCCGTTTCCAAGTTCAAGAAGGTTATTTCTCTTCTGGGTCGAACCAGAACCGGTCATGCTCGATTTAGAAGAGCCCCTCTGCCGCAACCTCCACCTCCTGCCGTTAATCTAAAGCCCGAGCCACAACCTTCTGAGCCCAAAGTTTACTATGCGACGCCGTTGCAGCAGATCCCACCGGCCCTTCTCCAACACCAACCCCTCGGCGAACAACATCCCCTGATCCCAAAAAATGGGGTGATTGAGAGGAAGGACTCGTTTAAAACCATTAATTTCTCGTATTCCTCTGCCGCGACTTCGTTTATGTCGTCTCTTACTGGCGATACTGATAGTAAACATCCGTCCTCGTCGTCGCCGGCGACTGCTTTTCAGATCACGAATCTGTCTCAGGTCTCCTCAGCGGGAAAGCCTCCTCTTTCTTCTTCTTCGCTGAAGAGAAAGTGTAGCTCCGAGAACTTGGGTTCCGGCAAGTGCGGCAGTTCCTCTAGTCGTTGCCATTGTTCTAAAAAGAGAAAAATGCGGTTGAAGAGAGAAGTGAGGGTGCCCGCAATAAGCTTGAAGATGGCTGATATTCCACCTGATGATTATTCATGGAGGAAGTACGGACAGAAACCCATTAAAGGATCCCCTCATCCTAGGGGATACTACAAGTGCAGTAGTGTTAGAGGGTGTCCAGCACGCAAACACGTAGAGCGAGCTCTGGACGATCCATCCATGTTAGTAGTCACCTATGAAGGCGATCACAATCACTCACTCTCTGCCACCGATTCAACGAATCTCATATTGGAATCTTCTTAG 1011 0.4965 MAVELMVGYRNDSFAAKMDDNVVQEAASGLESVEKLIRLLSQTQQQFHSSSSSSASKSSLDIEMDCKAVADVAVSKFKKVISLLGRTRTGHARFRRAPLPQPPPPAVNLKPEPQPSEPKVYYATPLQQIPPALLQHQPLGEQHPLIPKNGVIERKDSFKTINFSYSSAATSFMSSLTGDTDSKHPSSSSPATAFQITNLSQVSSAGKPPLSSSSLKRKCSSENLGSGKCGSSSSRCHCSKKRKMRLKREVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGDHNHSLSATDSTNLILESS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2095 336 MobiDBLite consensus disorder prediction 97 112 - -
Acco11g2095 336 Pfam Plant zinc cluster domain 216 261 IPR018872 -
Acco11g2095 336 Gene3D WRKY domain 249 324 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco11g2095 336 MobiDBLite consensus disorder prediction 199 233 - -
Acco11g2095 336 Pfam WRKY DNA -binding domain 265 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco11g2095 336 SMART WRKY_cls 263 323 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco11g2095 336 ProSiteProfiles WRKY domain profile. 258 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco11g2095 336 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 22 328 IPR044810 GO:0003700
Acco11g2095 336 FunFam WRKY transcription factor 65 247 324 - -
Acco11g2095 336 SUPERFAMILY WRKY DNA-binding domain 260 323 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco11g2095 336 MobiDBLite consensus disorder prediction 92 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2095 Acco-ChrAcco11 34979985 34981345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2095 17 321 WRKY Transcription Factor Family AT2G24570 45.794 1.49e-70 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco11g2095 WRKY 7.2e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g2095 11 34979985 34981345 Acco11g2095 11 34979985 34981345 ECH