Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2091 ATGGCTCTCAGGGAAGATGCCCAGGATTTGCAGGACTCTTCGTTATTCCTTGATGCTCTCCTCTGTGAGGAAGATGGCTTCGACCAAGAAGAATCTCCTGAGAGGGATATTCATGATGATGACTCAGATTCGGCCGTTAGAGATCCTTCTTCTTTACCCTTCATTTTGTTGGAAAGTGACTTGTTCTGGGAAGAAGCTGAGTTTGTCTGCCTTATCTCTAAGGAGGGAGAAACTCATTTAAATTCAAATAATCTAATTTCCGATGAGACTCTGCAGAAAGCTCGCGAGGAGGCTGTGAGATGGATTTCAAAAGTTTGTGGGCACTATGGTTTCTCTGCTTTGACTACAGTTCTGTCTGTGAACTACTTGGATAGGTTCGTGACCAACCTCACGTTTCAGAAGGATAAGCCATGGATGACTCAGCTTGCTGCTGTTGCCTGTTTAGCTCTGGCTGCCAAAGTGGAAGAGATCCAAGTCCCTCTTCTTTTGGACCTCCAGGCGGAGCAATCGAAGTACTTGTTTGAAGCAAAGACAATACAGAGAATGGAGCTCCTAGTGTTATCAACTCTTAACTGGAGGCTGAACCCTGTGACTCCAATCTCCTTCTTTGAACTTATTGTCAGAATGTTAGGTCTAAAGAGCCGCTTGCACTGGGAATTCCTGTTCCGGTGCGAGCGTGTGCTTCTCTGTCTCATCCTGGATTCAAGGCTTATGAGTTATCTTCCATCTACATTAGCTGTTGCCATAATGATCCATGTCATTAGTGAGGTTGAACCATTAAATGCAATGGAGCACAGAAATCAGCTAATGGATTTGCTCAAAATCAGTGAGGAACAAGTGAATGAATGCTACAAGCTTATCCTGAAATTATTATGCTGTCATGAAGACATTCAAAATTTTAAGCAGAAACGCAAGCGGTTGTCTAGCCCAGATGGTGTCATTGATGTGTCTTTCAGCGGTGATTATTCAAATGACTCGTGGCCTAAAGCATCATCACTCTCATTGTCACTTGAGCCAATGTTTAAGCGAAGCAGAGCCCTAGAGCAGCAGATGCAATTGCCTTCCATTAATCGTGTGTCTATTGATGTTCTTCACAGCCCTCGGTGTTCCATTGTTGAAACCCTTTTTGAAGTTGCTTGCCTGGTAGGTGAAGAGGATTTTGGGGAAGAAGACTGCTCTGCTATGAGGAAAACGATTCAATTGTTATTGTGGAATAGTGGTCCTACTCTCACTTGCCATGGTTGGGTATGGCTACGTGTAGGTGCAGTTGCATTATGTTACGAGGCATTATGTTTTTGTGCAAAAAGTGGTTCGCATGATGGGCTTGCATTTTCAAAGTGA 1341 0.4385 MALREDAQDLQDSSLFLDALLCEEDGFDQEESPERDIHDDDSDSAVRDPSSLPFILLESDLFWEEAEFVCLISKEGETHLNSNNLISDETLQKAREEAVRWISKVCGHYGFSALTTVLSVNYLDRFVTNLTFQKDKPWMTQLAAVACLALAAKVEEIQVPLLLDLQAEQSKYLFEAKTIQRMELLVLSTLNWRLNPVTPISFFELIVRMLGLKSRLHWEFLFRCERVLLCLILDSRLMSYLPSTLAVAIMIHVISEVEPLNAMEHRNQLMDLLKISEEQVNECYKLILKLLCCHEDIQNFKQKRKRLSSPDGVIDVSFSGDYSNDSWPKASSLSLSLEPMFKRSRALEQQMQLPSINRVSIDVLHSPRCSIVETLFEVACLVGEEDFGEEDCSAMRKTIQLLLWNSGPTLTCHGWVWLRVGAVALCYEALCFCAKSGSHDGLAFSK 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2091 446 Gene3D - 81 285 - -
Acco11g2091 446 MobiDBLite consensus disorder prediction 27 47 - -
Acco11g2091 446 CDD CYCLIN_AtCycD-like_rpt1 94 192 - -
Acco11g2091 446 FunFam D6-type cyclin 79 195 - -
Acco11g2091 446 SUPERFAMILY Cyclin-like 65 195 IPR036915 -
Acco11g2091 446 SMART Cyclin_C_2 197 322 IPR004367 -
Acco11g2091 446 PANTHER CYCLINS 62 296 IPR039361 -
Acco11g2091 446 FunFam CYCLIN D32 196 285 - -
Acco11g2091 446 Gene3D - 82 195 - -
Acco11g2091 446 SUPERFAMILY Cyclin-like 179 312 IPR036915 -
Acco11g2091 446 SMART cyclin_7 100 188 IPR013763 -
Acco11g2091 446 CDD CYCLIN_AtCycD-like_rpt2 197 287 - -
Acco11g2091 446 Pfam Cyclin, N-terminal domain 72 195 IPR006671 -
Acco11g2091 446 Pfam Cyclin, C-terminal domain 197 311 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2091 Acco-ChrAcco11 34941694 34944572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2091 1 358 Core Cell Cycle Gene Families AT5G67260 47.554 1.45e-99 302
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g1923 12 30719068 30723858 Acco11g2091 11 34941694 34944572 CCT
Acco11g2091 11 34941694 34944572 Acco12g1923 12 30719068 30723858 ECH
Acco05g1964 05 35986247 35987640 Acco11g2091 11 34941694 34944572 ECH
Acco11g2091 11 34941694 34944572 Acco11g2091 11 34941694 34944572 ECH