Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2084 ATGTGGCACTCAAAAGTTGTTCTCCATTTATGGTGGAGTATTATTTTGGTGTTTCTCGTTGTTAATCAGTGCTCTGGCCTGAACAGAGACGGTGCTTTGTTGTTGTCCTTTAAGTACTCTGTTGTGAGTGATCCTGTTGGCGTGCTTAGAAGCTGGAATTACAGCAACGAAACACCTTGTTCATGGAATGGAGTTACGTGTTCGAATATTTCAAGTGGAGAACAGAAGGCTCAAGCTCGAGTGATTGGCTTATCTCTTTCGAATTCTAAGCTTGTGGGTTCAATTCCTTATGATCTGGCTTTGATTGACCACCTCAGAATTCTCGACCTTTCTGGCAATTCACTCAATGGGTCTCTTCCCTCTTCACTTTTTCAGGCTTTTGAACTTGAGTCTCTTAACTTGTCTGGTAATTTGATAGGTGGGGAGGTTCCTGACTCCATAGTACAGCTTAGAAATCTTCAGGTTCTCAACCTTTCTGACAATGCCTTGGCTGGAAAAATACCTACCAATCTGGCAAATATGCAAACTCTTACAGTGGCTTCTTTGAATAATAATTACTTGTCGGGTTGTCTTCCTGGCGGGTTTCAAACTTTACAGGTTTTGGATCTATCTTCCAATTTGTTCAATGGATCTCTGCCTCCAGATTTTGGTGGGGCAAGTTTGCGTTACTTAAACATGTCCTACAACAACATTCTGGGGAAAATCCCTCCAGAGTTTGCAGAGAAAATCCCAGGTAACGCCACCATCGACCTTTCCTTCAACAATCTCACCGGCCAAATTCCTGATTCCTTAGTTTTAATCAATCAACAGTCCAAGTCATTTTCCAGGAACCCTGATCTTTGTGGAGAACCAACCAAGAATCCATGTCCTGTTCCTCCTCCATCTTCTCCACCAAATATTCCTGTTGCTACTTCCCCTGCTTTGGCTGCATTTCCAAACACGTTTGACTCTCCTCCTGATTTCGCTGCTTCACCTTCTTTATCTTCGCACTCTAAGCGAAACGGGATTCGACGAACAACTGTTATAGGAATCGTGGTTGGAGATATTGTTGGCATTATAATCATAGCTTTAATTTTCGTGCATGTCTACCAGTTGAAGAGGAAAAAAAATGTCGATAGCGCATTGAAGATGGAAGCTACTGCAGTGAGGAGTGCTTGGTCGCCGCCGTCATCACCGGAGTCAAGAGGGTTCAGAAGGTGGTCGTGCTTGCGCAAGAGGGCCGAAGAGAAAGAGTCCACCACTAGCTCTTCCGGTAGCGAAGTGGAAGCACAAAATGGGCAAAACCAAAAGGTTCATGACAATCGGAGACAACATGAACAAGAAGCAGGACAGGGGAAAACAGGAACACTAATAACAGTGGACGATGAAAAAGAGCTTGAAGTGGAAACACTGCTAAAAGCTTCGGCATTTATACTGGGGGCAACTGGTTCCAGTATAATGTACAAAGCCGTCCTTGAAGATGGTTCGGCGTTAGCAGTTCGAAGAATCGGAGAGAATGGGCTCGAACGGTTCAAGAACTTGGAGACACAAGTCCGGGTCATAGCCAAATTGGTCCACCCGAATCTGGTTCGTGTTCGTGGCTTCTACTTGGGAAACGACGAGAAGCTAATCATCTACGACTTCGTTCCAAACGGCAGCCTCGCAAATTTCCGTTACAGGAAGGTGGGCTCTTCTCCTTGTCACCTGCCATGGGAGGTCAGACTCAAGATTGCGAGAGGCGTGGCACATGGCTTGGCGTATCTTCACGACAAGAAGCACGTGCATGGAAACCTGAAGCCGAGCAATATTCTGTTGGGCAACGACATGGAGCCCAAGATTGGAGACTTCGGGCTCGAGAGAATTGTAACCGGAGATTCCAGTTGTAAAGCTGGCGCATCAGCCCGGATTTTTGGCAGCAAGAGATCCACGGCCTCTAGGGATAGCTTTCCAGACGTTGCAGTTGGGCCCAGCCCAAGCCCAAGCCCGAGTGCCATAGGTGGTGTGTCTCCTTACCATGCACCGGAGTCGCTCAGAAACCTGAAGCCTAATCCCAAGTGGGATGTATACTCCTTCGGCGTCATTTTCTTGGAGCTATTGACTGGGAAGATTGTGGTTTTGGATGATATGGGTCAACCACCTGGGTTTTTGGTTGAGGACAAGGCCCGGGCTCTTCGGATGGCTGACATGGCGATTCGAGCTGACATGGAGGGAAAAGAGGAGTCGTTATTGGCTTGGTTCAAGTTAGGATATAGTTGTGTGTCTAGCGTACCCCAGAAGAGGCCATCCATGAAAGAAGTGTTGCAAGTAATTGATAAAATACCCTCCTCGTTTTCCTCCTCACGTTATTATGCTCACTAA 2337 0.4664 MWHSKVVLHLWWSIILVFLVVNQCSGLNRDGALLLSFKYSVVSDPVGVLRSWNYSNETPCSWNGVTCSNISSGEQKAQARVIGLSLSNSKLVGSIPYDLALIDHLRILDLSGNSLNGSLPSSLFQAFELESLNLSGNLIGGEVPDSIVQLRNLQVLNLSDNALAGKIPTNLANMQTLTVASLNNNYLSGCLPGGFQTLQVLDLSSNLFNGSLPPDFGGASLRYLNMSYNNILGKIPPEFAEKIPGNATIDLSFNNLTGQIPDSLVLINQQSKSFSRNPDLCGEPTKNPCPVPPPSSPPNIPVATSPALAAFPNTFDSPPDFAASPSLSSHSKRNGIRRTTVIGIVVGDIVGIIIIALIFVHVYQLKRKKNVDSALKMEATAVRSAWSPPSSPESRGFRRWSCLRKRAEEKESTTSSSGSEVEAQNGQNQKVHDNRRQHEQEAGQGKTGTLITVDDEKELEVETLLKASAFILGATGSSIMYKAVLEDGSALAVRRIGENGLERFKNLETQVRVIAKLVHPNLVRVRGFYLGNDEKLIIYDFVPNGSLANFRYRKVGSSPCHLPWEVRLKIARGVAHGLAYLHDKKHVHGNLKPSNILLGNDMEPKIGDFGLERIVTGDSSCKAGASARIFGSKRSTASRDSFPDVAVGPSPSPSPSAIGGVSPYHAPESLRNLKPNPKWDVYSFGVIFLELLTGKIVVLDDMGQPPGFLVEDKARALRMADMAIRADMEGKEESLLAWFKLGYSCVSSVPQKRPSMKEVLQVIDKIPSSFSSSRYYAH 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2084 778 CDD STKc_IRAK 472 766 - -
Acco11g2084 778 Pfam Protein kinase domain 472 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g2084 778 Pfam Leucine rich repeat 104 163 IPR001611 GO:0005515
Acco11g2084 778 Gene3D Ribonuclease Inhibitor 195 291 IPR032675 -
Acco11g2084 778 FunFam Leucine-rich repeat receptor-like protein kinase 197 291 - -
Acco11g2084 778 Coils Coil 421 441 - -
Acco11g2084 778 Gene3D Phosphorylase Kinase; domain 1 427 541 - -
Acco11g2084 778 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 156 767 IPR046959 -
Acco11g2084 778 Pfam Leucine Rich Repeat 220 239 IPR001611 GO:0005515
Acco11g2084 778 SUPERFAMILY L domain-like 28 284 - -
Acco11g2084 778 SUPERFAMILY Protein kinase-like (PK-like) 471 762 IPR011009 -
Acco11g2084 778 PRINTS Leucine-rich repeat signature 105 118 - -
Acco11g2084 778 PRINTS Leucine-rich repeat signature 150 163 - -
Acco11g2084 778 MobiDBLite consensus disorder prediction 408 449 - -
Acco11g2084 778 ProSiteProfiles Protein kinase domain profile. 436 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g2084 778 MobiDBLite consensus disorder prediction 636 661 - -
Acco11g2084 778 SMART LRR_typ_2 150 174 IPR003591 -
Acco11g2084 778 SMART LRR_typ_2 102 126 IPR003591 -
Acco11g2084 778 SMART LRR_typ_2 195 218 IPR003591 -
Acco11g2084 778 Gene3D Ribonuclease Inhibitor 27 194 IPR032675 -
Acco11g2084 778 FunFam Leucine-rich repeat receptor-like protein kinase 27 193 - -
Acco11g2084 778 Gene3D Transferase(Phosphotransferase) domain 1 542 775 - -
Acco11g2084 778 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2084 Acco-ChrAcco11 34921337 34924003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2084 14 778 Receptor kinase-like Gene Family AT4G37250 56.943 0.0 802
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco11g2084 Pkinase 3.2e-30 CL0016