Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2078 ATGGAAACGGTCCCAAATTTACTGCCGTCGAGCCAATTTCAGTCACTTGTATTCTACCATAGAGCCAAGAGTATTGGATTCTCCAATTCCTTTCTCCACCTACCCTCCCTTCCTTGCTATTCAACTTTAGGCAGCCGCTTTGCTTCTCCCAAACTTCTCAGGCTTCACCGCCGTCCTTTGCTTTGTTTTGCTGAATCCGGCACTGATCACCACCACCACAGCGCTCGAACCCAGCACGACCATCACGGTCACCACCACCATCACAGCGATCAAACTCACCATGACCATCACGGCTGCAACAACCACCACCACTTACACGGCAACGATCATGCGAATCTTACCGGACCTCAAAAAGCAATTGTTGGGTTCGCCAAAGCCACCAGATGGATAGACTTGGCAGATTTCTTAAGGGAGCACTTGCATTTATGCTGCTGTTCAACGGCTTTATTTGTGGCTGCTGCCATTTGCCCCCATACCTTGCCTAAGCCCGTCATCAAGCCTGTTCAAAATGCTCTCATTTTTATTGCTTTTCCTTTAGTTGGGATTCCTGCATCACTTGATGCTCTAGTTGAAATTGGCAGTGGAAAAGTAAATATCCATGTGTTGATGGCTCTGGCAGCCTTTGCATCCGTATTTATGGGAAATTCTTTGGAGGGAGGATTGCTTCTTGCTATGTTTAATCTGGCTCATATAGCCGAGGAGTACTTCACCAGCCGTTCAATGATTGATGTTAAAGAGTTGAAGGACAATAATCCAGATTTTGTTCTTGTGCTGGAAACTGACAGTGATGATAAACCTCCTAATACCTTTGACTTAGCGTACGAGAGGGTTCCTGTGCATGACGTGACAGTAGGCTCATATATCTTGGTTGGAGCTGGGGAGTCTGTGCCTGTAGATTGTGAAGTTTTCAAAGGCAGTGCTACAATTACCATTGAGCATCTGACTGGAGAAGTCAAACCTTTGGAGGCTGGAGTTGGAGATAGAGTTCCTGGAGGTGCAAGGAATTTAGATGGGAGAATAATTATAAAGGCAACAAAGACTTGGAAGGAGTCGACTCTTAACAGAATTGTACAGTTGACTGAAGAAGCGCAGTTGAATAGACCAAAGCTTCAAAGGTGGCTGGATGAATTTGGTGAGCAATACAGCAAAGTTGTTGTGGTGTTATCAGTTGCTATTGCTGTCATCGGCCCACTCATATTTAAGTGGCCATTTATTAGTACACCAGCTTGCAGAGGTTCAATCTATAGAGCCCTAGGTCTTATGGTGGCTGCGTCTCCATGTGCCTTGGCTGTGACTCCATTGGTATACGCCACAGCAATTAGCTCCTGTGCAAAAAAGGGGATATTGCTGAAAGGTGGACATGTTCTGGATGCTCTATCTTCTTGCCATACAATCGCATTTGACAAAACAGGAACACTGACAACTGGTGGACTTGTATTCAAGGCAATTGAACCAATTTATGGTCATATTGTTACAAATAACATGACAAAAATTTCTTCCTGCTGTATTCCTAGCTGTGAAAAAGAAGCTCTTGCTGTTGCTGCTGCCATGGAAAAGGGTACCACTCACCCCATTGGAAGGGCGGTTGTTGACCACAGTGAGGGGAAAGACCTCCCATCTGTTTCTGTTGAGAGTTATGAGTATTTTCCCGGTAGAGGACTTGTTGCCACTCTCAACAGCATTGAGACAGAAACTGGAGGCGCCAAGCTTTTAAAAGCATCACTTGGATCTGTGGATTTCATCACCTCATTATGTCAATCTGAAGACGAGTCTAAAAGGATCAAAGAAGCAGTTAGTGCATCTTCATATGGAAGTGAATTTGTTCGTGCTGCCCTCTCAGTTGACAAAAAGGTAACACTGATTCACCTAGAGGATAGACCTCGGCCTGGGGTTTCTAATGTCATACAAGAGTTGCAAGGTGAAGCAAGCTTTCGCGTGATGATGTTAACTGGTGACCACGAGTCCAGTGCAAGGAGAGTTGCAAGTTCTGTGGGCATCAATGAGGTTTATTGCAACCTTAAGCCTGAAGATAAGCTGAGTCATGTGAAGGACATCTCAAGGGATATGGGGGGAGGTCTAATCATGGTTGGTGAGGGGATTAATGATGCCCCGGCACTTGCTGCTGCAACAGTAGGGATTGTGCTTGCTCATCGTGCTAGTGCAACTGCCATAGCAGTTGCAGATGTGCTGTTGCTTCGGGAAAATATTTCTGCAGTACCATTTTGTATTGCCAAGTCTCGCCAAACAACTTCACTGATTAAACAAAATGTGGCCCTGGCATTGTCCAGCATTTTCATGGCATCTCTTCCGTCAGTCTTGGGATTTTTGCCCTTGTGGTTAACGGTTCTGTTGCATGAAGGTGGGACCCTGCTTGTTTGTCTGAATTCCATACGTGGTCTAAATGAACCAGCTTGGTCATGGAAGCAGGATGTACTCCTTTCGATAAACAGAGTAAAATCTAAACTTCTGTCACTCACCACAAACAATACTAGCTCGAGCGCCTTGGACACCGCTAATTTGTGA 2523 0.4538 METVPNLLPSSQFQSLVFYHRAKSIGFSNSFLHLPSLPCYSTLGSRFASPKLLRLHRRPLLCFAESGTDHHHHSARTQHDHHGHHHHHSDQTHHDHHGCNNHHHLHGNDHANLTGPQKAIVGFAKATRWIDLADFLREHLHLCCCSTALFVAAAICPHTLPKPVIKPVQNALIFIAFPLVGIPASLDALVEIGSGKVNIHVLMALAAFASVFMGNSLEGGLLLAMFNLAHIAEEYFTSRSMIDVKELKDNNPDFVLVLETDSDDKPPNTFDLAYERVPVHDVTVGSYILVGAGESVPVDCEVFKGSATITIEHLTGEVKPLEAGVGDRVPGGARNLDGRIIIKATKTWKESTLNRIVQLTEEAQLNRPKLQRWLDEFGEQYSKVVVVLSVAIAVIGPLIFKWPFISTPACRGSIYRALGLMVAASPCALAVTPLVYATAISSCAKKGILLKGGHVLDALSSCHTIAFDKTGTLTTGGLVFKAIEPIYGHIVTNNMTKISSCCIPSCEKEALAVAAAMEKGTTHPIGRAVVDHSEGKDLPSVSVESYEYFPGRGLVATLNSIETETGGAKLLKASLGSVDFITSLCQSEDESKRIKEAVSASSYGSEFVRAALSVDKKVTLIHLEDRPRPGVSNVIQELQGEASFRVMMLTGDHESSARRVASSVGINEVYCNLKPEDKLSHVKDISRDMGGGLIMVGEGINDAPALAAATVGIVLAHRASATAIAVADVLLLRENISAVPFCIAKSRQTTSLIKQNVALALSSIFMASLPSVLGFLPLWLTVLLHEGGTLLVCLNSIRGLNEPAWSWKQDVLLSINRVKSKLLSLTTNNTSSSALDTANL 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2078 840 MobiDBLite consensus disorder prediction 93 109 - -
Acco11g2078 840 SFLD p-type atpase 448 749 IPR044492 -
Acco11g2078 840 Pfam E1-E2 ATPase 274 446 - -
Acco11g2078 840 Gene3D - 477 627 IPR023299 GO:0000166
Acco11g2078 840 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 57 838 - -
Acco11g2078 840 Gene3D - 459 747 IPR023214 -
Acco11g2078 840 NCBIfam heavy metal translocating P-type ATPase 199 798 IPR027256 GO:0006812|GO:0016020|GO:0019829
Acco11g2078 840 MobiDBLite consensus disorder prediction 75 92 - -
Acco11g2078 840 CDD P-type_ATPase_HM 143 798 - -
Acco11g2078 840 SUPERFAMILY HAD-like 464 796 IPR036412 -
Acco11g2078 840 ProSitePatterns E1-E2 ATPases phosphorylation site. 468 474 IPR018303 -
Acco11g2078 840 Gene3D - 237 364 - -
Acco11g2078 840 NCBIfam HAD-IC family P-type ATPase 611 776 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco11g2078 840 NCBIfam HAD-IC family P-type ATPase 274 493 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco11g2078 840 SFLD C1.7: P-type atpase like 448 749 - -
Acco11g2078 840 SUPERFAMILY Calcium ATPase, transduction domain A 274 359 IPR008250 -
Acco11g2078 840 MobiDBLite consensus disorder prediction 71 111 - -
Acco11g2078 840 Pfam haloacid dehalogenase-like hydrolase 464 709 - -
Acco11g2078 840 PRINTS P-type cation-transporting ATPase superfamily signature 696 715 - -
Acco11g2078 840 PRINTS P-type cation-transporting ATPase superfamily signature 109 123 - -
Acco11g2078 840 PRINTS P-type cation-transporting ATPase superfamily signature 619 630 - -
Acco11g2078 840 PRINTS P-type cation-transporting ATPase superfamily signature 642 652 - -
Acco11g2078 840 PRINTS P-type cation-transporting ATPase superfamily signature 720 732 - -
Acco11g2078 840 SUPERFAMILY Calcium ATPase, transmembrane domain M 201 506 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2078 Acco-ChrAcco11 34883506 34898222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2078 116 821 Primary Pumps ATPases AT4G37270 76.487 0.0 1092