Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2063 ATGCCTCCCCAAGATCTCGAGCACGAACAACCACTGTTAGTGGATTCTGACAAGCAAACAGCCGAAGCTGCCTACGATTCCTCTGAGAAAGTCGTAGTCGTCGGAATCGACGAGTCCAACAATGAATACGACGACTGTGATCGTGCCCCGCCGTTTTCATGGAAGAAGCTCTGGCTCTTCACGGGCCCTGGTTTTCTTATGAGCATTGCCTTTCTCGATCCTGGAAATCTTGAGGGAGATCTTCAGGCTGGTGCAATTGCTGGCTACTCCCTCTTATGGCTTCTCATGTGGGCCACAGCCATGGGGCTTGTGGTTCAGCTTTTGGCGGCACGGCTCGGAGTGGTGACTGGGAAGCATCTGGCTGAACACTGCAGGGAGGAGTATCCAACTTGGGCGAGGATGGTACTGTGGGTTATGGCGGAGTTAGCTCTGATTGGGTCCGACATTCAAGAGGTTATTGGTAGCGCTATTGCTATCAGAATTCTAAGTAACGGGGTTCTACCCCTTTGGGCCGGGGTCGTCATCACAGCTTGTGATTGTTTTATTTTCCTGTTTCTTGAGAACTACGGTGTGAGGAAATTGGAAGCATTTTTTGCTGTTCTCATTGGTGTAATGGCCATCTCATTTGCGTGGATGTTTGGTGAAACAAAGCCCTGCGGAAAAGATCTTCTTCTTGGTATTTTGGTTCCGAAACTAAGCTCCAGAACAATACAGAAGGCTGTTGGAGTTGTGGGTTGCATTATTATGCCTCACAATGTATTCTTGCACTCGGCACTTGTTCAGTCAAGACAGGTTGAGCAGAACAAGAAAGGCCGAGTTCAGGAAGCACTTAATTATTATTCTATAGAGTCAACCGCTGCCCTTATTATCTCCTTTATCATTAATGTATTTGTCACGACAGTGTTTGCCAAGGGTTTTTATGGAACTGACCTTGCAAATAGTGTTGGTCTTGTGAATGCTGGGCAGTATCTTGAAGAGAAGTATGGAGGTGGACTTCTGCCAATCTTATATATATGGGCTGTTGGGTTATTAGCAGCTGGTCAAAGTAGCACTATTACTGGGACTTATGCTGGACAGTTTATAATGGGGGGTTTTCTTAATTTAAGGTTGAAAAAATGGATGAGGTCATTAATTACACGGAGTTGTGCTATCATCCCAACTGTGACCGTTGCTCTTGTCTTTGAAACATCAGAGGACTCATTAGATGTTCTAAATGAATGGCTTAATGTTCTCCAGTCAATTCAAATCCCCTTTGCACTCATTCCCTTGCTTTTTTTGGTGTCCAAGGAGCACTTAATGGGCGCTTTCAGAATTGGTCCTGTCCTCAAGATAATTGCATGGTTTGTGGCTGCTCTGGTGATAGCGATCAACGGGTATCTTATGCTAGAATTCTTCAACTCTGAGGCCAATGGAGTAATGCTTGGTGCTGTTTTATGTGCTTTTGCGGCTGCATATGTTGCATTCATACTTTACCTTGTTTCAAGGGCCATCACCTTTTCACCTGGGCAAAGTTCAACACAATCAAAGATGATTACGAACTCTGATAATTAA 1551 0.4507 MPPQDLEHEQPLLVDSDKQTAEAAYDSSEKVVVVGIDESNNEYDDCDRAPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLVVQLLAARLGVVTGKHLAEHCREEYPTWARMVLWVMAELALIGSDIQEVIGSAIAIRILSNGVLPLWAGVVITACDCFIFLFLENYGVRKLEAFFAVLIGVMAISFAWMFGETKPCGKDLLLGILVPKLSSRTIQKAVGVVGCIIMPHNVFLHSALVQSRQVEQNKKGRVQEALNYYSIESTAALIISFIINVFVTTVFAKGFYGTDLANSVGLVNAGQYLEEKYGGGLLPILYIWAVGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRSLITRSCAIIPTVTVALVFETSEDSLDVLNEWLNVLQSIQIPFALIPLLFLVSKEHLMGAFRIGPVLKIIAWFVAALVIAINGYLMLEFFNSEANGVMLGAVLCAFAAAYVAFILYLVSRAITFSPGQSSTQSKMITNSDN 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2063 516 NCBIfam Nramp family divalent metal transporter 62 432 - -
Acco11g2063 516 Hamap Divalent metal cation transporter MntH [mntH]. 39 465 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco11g2063 516 PRINTS Natural resistance-associated macrophage protein signature 166 185 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco11g2063 516 PRINTS Natural resistance-associated macrophage protein signature 191 212 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco11g2063 516 PRINTS Natural resistance-associated macrophage protein signature 240 263 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco11g2063 516 PRINTS Natural resistance-associated macrophage protein signature 136 162 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco11g2063 516 PRINTS Natural resistance-associated macrophage protein signature 347 366 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco11g2063 516 PRINTS Natural resistance-associated macrophage protein signature 409 428 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco11g2063 516 PRINTS Natural resistance-associated macrophage protein signature 375 392 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco11g2063 516 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 49 499 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco11g2063 516 Pfam Natural resistance-associated macrophage protein 78 439 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco11g2063 516 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 55 433 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2063 Acco-ChrAcco11 34745887 34748958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2063 3 509 Inorganic Solute Cotransporters AT2G23150 75.591 0.0 786
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g2063 11 34745887 34748958 Acco12g1906 12 30436893 30439526 CCT
Acco11g2063 11 34745887 34748958 Acco11g2063 11 34745887 34748958 ECH