Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2050 ATGTTCCCGTGTCCAATTTGTAGAGCTCACGGTTTCAGCAGTAATTCGGAGTCTGCTGGGACGGAATTCCCAGTGGAAAATGCGTACGGGCTGTTAGGAGTGTCACAGACCAGTTCGTTTGCTGAGATTAAAGCGTCTTTTCGCAGATTGGCCAAGGAAACTCACCCAGACCTTGCTGACTCAAGTAGCGATTCATCTGCTTCTCGACGATTTGTGCAAATCCTGGCCGCCTACGAGATTCTTTCAGATTCCAAGAAGAGAGCTCATTATGACAGATACCTGTTGTCTCAGAAGAAGCTTGTGGAGAAGCGTACTAGGCAGGGTTCAGAGTTACACTTCTATAGATCACATGAAACAACTTCCAAGGAGATTGAAGTTGTTGAATGGTTAAAGTGGTACAGATTAGCTATAAATGATATTTTATCAGAGAAAAGGGTAGTAGTTGGAACAGGCTATTTTGATACACTTGAGAGAGATTTTTACTCAGCCATACATGCGGCTTATTTTGGCCCTGAAATTGAGTCAATGGAGCTTCTCCCTGAGTGCTTTGAGGCAGAGGAAAGGTCCTCTTGTGAAACACCGGAGGTTTTGCACATAGTTTCTGGTCGCGATCTTTTTGGGATGGTTTGCCTAGCCAGTAAGAACCCAGAGATATCATCTACCAATAATGAAAAGTTAACTTCTTTCAGATCCTTCCAACCAGGACTATGTCAATCTATAAAGAATGCAAACATCCACACAAATGCAGGAGTTCCATATGAATTTGGAATTCCACGATTTCATGACTCTAAAATATCAAGTCATATATCAGATGCATATAGAGATCTAGAATTGCTTGTATCTGGAAAGGTGGTTGCTGTGGCCTCCAGGTTCCCTCCTGGAAGCTATTCTGATGCTGAAGTAGCAGAAGATCACATTCATGTTTATCTTAATTCAGATGAATACACCAACCATACCAACAACTGTGATTCTAAAAATTACTTCACAAGTAGTTCAGCCGTCACACAAACTCATATAGGAACCATAGCTGGGCTCGGGACCAGTTCAGATGAGAGTTCCTGTAATGTCTATGACAGTAGAGGGGCAAAGACCCATGTGATTATGAAACACAGGACCTTGCTGGTGAAGCACATGCACTGGTATCAAATTGGAGAAAAGGTTTCTATTTGTGAGTGTAGATGCACGAGAGCGAAATTACCATCAAGCAAATATTGGCTATTTGAGCCTCGTTGTGGTTTGCATGACATAGGGGGTTGGTATGTTGAAACGTATGGCAAAGATAAGAAAGGTCTAACTATCCCATCTCAAAGGTTATGGGATGGCTGGGATGACGGTCAGCATTTTGAGAGAAGACTTCACCCAGCAATGTATCTACTTGCTCTTGCATATAGGACACTTGATCTTGAATATGCCAAAGTAAGAAAACAAACATTTAGGAAAGCTATGGAAGGGCAACTGTTTAGAATCCTTCGTTGGTGCAAAAAACTTGGTTAA 1494 0.421 MFPCPICRAHGFSSNSESAGTEFPVENAYGLLGVSQTSSFAEIKASFRRLAKETHPDLADSSSDSSASRRFVQILAAYEILSDSKKRAHYDRYLLSQKKLVEKRTRQGSELHFYRSHETTSKEIEVVEWLKWYRLAINDILSEKRVVVGTGYFDTLERDFYSAIHAAYFGPEIESMELLPECFEAEERSSCETPEVLHIVSGRDLFGMVCLASKNPEISSTNNEKLTSFRSFQPGLCQSIKNANIHTNAGVPYEFGIPRFHDSKISSHISDAYRDLELLVSGKVVAVASRFPPGSYSDAEVAEDHIHVYLNSDEYTNHTNNCDSKNYFTSSSAVTQTHIGTIAGLGTSSDESSCNVYDSRGAKTHVIMKHRTLLVKHMHWYQIGEKVSICECRCTRAKLPSSKYWLFEPRCGLHDIGGWYVETYGKDKKGLTIPSQRLWDGWDDGQHFERRLHPAMYLLALAYRTLDLEYAKVRKQTFRKAMEGQLFRILRWCKKLG 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2050 497 Gene3D DnaJ domain 17 114 IPR036869 -
Acco11g2050 497 SUPERFAMILY Chaperone J-domain 26 96 IPR036869 -
Acco11g2050 497 CDD DnaJ 27 83 IPR001623 -
Acco11g2050 497 PRINTS DnaJ domain signature 66 86 IPR001623 -
Acco11g2050 497 PRINTS DnaJ domain signature 47 62 IPR001623 -
Acco11g2050 497 PRINTS DnaJ domain signature 29 47 IPR001623 -
Acco11g2050 497 Pfam DnaJ domain 27 91 IPR001623 -
Acco11g2050 497 ProSitePatterns Nt-dnaJ domain signature. 71 90 IPR018253 -
Acco11g2050 497 ProSiteProfiles dnaJ domain profile. 27 94 IPR001623 -
Acco11g2050 497 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 8 496 - -
Acco11g2050 497 SMART dnaj_3 26 86 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2050 Acco-ChrAcco11 34658968 34663258 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2050 29 91 C2H2 Transcription Factor Family AT1G74250 46.970 1.55e-09 58.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g2050 11 34658968 34663258 Acco11g2050 11 34658968 34663258 ECH