Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2039 ATGAGTGTCGTGAAATACATGACATACATGGACCTGTGCCTCAACAGTCAAACTAACTTGCGTCTCCGTAGAATTAAAGCTTACTTTCTTCTTGTTGAAAAACTAAAAAAGATTCTGGTACAAGTGGCTCGTGACCGCGACAGCTTGGTCGTCTCCTACCTCAATATATACCCCCCTTATTTTTCCACTTTAGCGTATAATTTACTCCTAACTTTGCAGCCAAACCCCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTTCTTCCACTCCATAAGCTGCAAAATGGGTCCTTGTCGTCTCATACTTATGTTGTCACTCTCATTGAGTCTGTGTCTGTTCCCATATTCCACTTCTGCTCAATTGAGCACAAATCACTATGCCAATATCTGTCCCAATGTCGAGAGCATTGTCAGAACAGTGGTACGAAACAAGTTTCAGCAGACATTTGTCACAGTCCCTGCAACCCTTCGTCTCTTCTTCCACGATTGCTTGGTCCAGGGCTGTGATGCTTCGGTGTTGGTAGCATCAACAGGGAACAAACAAGCAGAGAAGGATCACCCGGACAATCTGTCATTGGCCGGTGATGGATTTGACACAGTGATCAAAGCAAAAGCAGCAGTGGACGCTGTTCCTCAGTGCAGAAACAAAGTATCTTGTGCTGATATTTTGGCTCTGGCTACTCGTGAAGTTGTCTCACTGGCGGGAGGACCATTCTATCAAGTTGAATTGGGAAGATTTGACGGACTTGTCTCCAGAGCTTCCGATGTGAACGGCAGGCTGCCTCAGCCAAACTTCAATTTGAACCAGCTCAATTCACTCTTTGCCTCTCATGGCCTCACCCAAACCGACATGATTGCCCTCTCAGGAGCACACACACTTGGGTTCTCTCATTGTAGCAGATTCTCCAATAGAATATACAACTTTAGCCCAGGTAGACCTGTGGATCCAACGTTGAACCCAGGGTACGCAAGCCAGCTCCAAGATATGTGTCCGAGGAACGTGAATCCGTTGATAGCCATCAACATGGACCCCACCACTCCAAGAACGTTTGACAATGCTTATTACCAGAATCTCCAGCAGGGTAAAGGGCTCTTCACCTCCGATCAAATCCTGTTCACCGATCCAAGGTCCAAGTCTACTGTCAATTCTTTTGCTTCCAATAAGAACGTCTTCAACGCCAATTTCATTACTGCCATCACCAAGCTCGGCCGCGTCGGAGTCAAGACTGCAAGGAACGGCAAGATTCGTAGCGATTGCTCTGTGCTCTGA 1281 0.4731 MSVVKYMTYMDLCLNSQTNLRLRRIKAYFLLVEKLKKILVQVARDRDSLVVSYLNIYPPYFSTLAYNLLLTLQPNPSSSSSSSSSSSSSSFFHSISCKMGPCRLILMLSLSLSLCLFPYSTSAQLSTNHYANICPNVESIVRTVVRNKFQQTFVTVPATLRLFFHDCLVQGCDASVLVASTGNKQAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPQCRNKVSCADILALATREVVSLAGGPFYQVELGRFDGLVSRASDVNGRLPQPNFNLNQLNSLFASHGLTQTDMIALSGAHTLGFSHCSRFSNRIYNFSPGRPVDPTLNPGYASQLQDMCPRNVNPLIAINMDPTTPRTFDNAYYQNLQQGKGLFTSDQILFTDPRSKSTVNSFASNKNVFNANFITAITKLGRVGVKTARNGKIRSDCSVL 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2039 426 CDD secretory_peroxidase 124 425 IPR033905 GO:0004601|GO:0042744
Acco11g2039 426 Pfam Peroxidase 141 391 IPR002016 GO:0004601|GO:0006979|GO:0020037
Acco11g2039 426 FunFam Peroxidase 265 406 - -
Acco11g2039 426 Gene3D - 128 425 - -
Acco11g2039 426 Gene3D Peroxidase, domain 2 265 406 - -
Acco11g2039 426 SUPERFAMILY Heme-dependent peroxidases 124 425 IPR010255 GO:0004601|GO:0006979|GO:0020037
Acco11g2039 426 ProSiteProfiles Plant heme peroxidase family profile. 124 426 IPR002016 GO:0004601|GO:0006979|GO:0020037
Acco11g2039 426 PRINTS Plant peroxidase signature 220 230 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco11g2039 426 PRINTS Plant peroxidase signature 199 212 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco11g2039 426 PRINTS Plant peroxidase signature 158 178 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco11g2039 426 PRINTS Plant peroxidase signature 401 414 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco11g2039 426 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco11g2039 426 PRINTS Plant peroxidase signature 134 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco11g2039 426 PRINTS Plant peroxidase signature 361 378 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco11g2039 426 PRINTS Plant peroxidase signature 286 298 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco11g2039 426 PRINTS Plant peroxidase signature 345 360 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco11g2039 426 PRINTS Haem peroxidase superfamily signature 347 362 IPR002016 GO:0004601|GO:0006979|GO:0020037
Acco11g2039 426 PRINTS Haem peroxidase superfamily signature 156 170 IPR002016 GO:0004601|GO:0006979|GO:0020037
Acco11g2039 426 PRINTS Haem peroxidase superfamily signature 221 238 IPR002016 GO:0004601|GO:0006979|GO:0020037
Acco11g2039 426 PRINTS Haem peroxidase superfamily signature 239 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Acco11g2039 426 PRINTS Haem peroxidase superfamily signature 287 302 IPR002016 GO:0004601|GO:0006979|GO:0020037
Acco11g2039 426 PANTHER - 106 425 IPR000823 GO:0004601|GO:0006979|GO:0020037
Acco11g2039 426 ProSitePatterns Peroxidases active site signature. 156 167 IPR019794 GO:0004601
Acco11g2039 426 ProSitePatterns Peroxidases proximal heme-ligand signature. 287 297 IPR019793 -
Acco11g2039 426 FunFam Peroxidase 128 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2039 Acco-ChrAcco11 34595344 34597730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2039 99 426 Peroxidase AT5G67400 66.768 9.88e-165 464