Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2037 ATGACGCAGTTCACACCTTCACTTCCTTCTTTGCACCAAATCACCACCACCACTCCTTTCTCCTCCAGGAACAAGAATAATCAGATACATAGAACTCGACCCTGGCCCGGGTTCCCTTCCTCCACCGCCTTCAATTCCTTCGGCGGCGCTAATTGCATGGAACAATTACTTGTTCACTGTGCCAACGCCATCGAATCCGACGACGTCACTCTTGCTCAGCAAATCCTCTGGGTTCTGAACAACATCGCCTCACCTGACGGCGATTCCAATCAACGCCTCGCCTCCGCCTTCAACCGCGCCCTCGCTGCCCGCGCCGCCAAATCCGGTAGCTGCAAAATGCTCGCCGTCGTGGCCGACGTCGCTCATAACACCAACCTCACCGCTATAGACATCCACAGCTTCTCCGTTATCGAGCTCGCCAACTTCGTCGACCTAACCCCTTGGCACCGATTCGGCTTCACCGCCGCCAACTCGGCCATTCTAGAAGTTACCGAGGGATTTTCAGTTATTCACATCGTCGACTTAAGCTCCACGCATTGCATGCAGATTCCCACGCTCATCGACGCCATCGCCACCCGCCACGAGGTCCCTCCGTTAATCAAGCTCACCGTCTCAGCTTCAAATAAGGACATTCCTCCGATACTTAACCTCTCCTACGACGAATTAGGCGCGAAGCTGGTAAGCTTCGCGAGGTCTAAGAACATAATATTGGAATTCAAAGTGATTTCCTCGAGTTATGAAGACGGATTCGCTTCTCTGATCGAACACCTTCGGTTGCAACAGATGGTTTTGGTGGCAGAAGGTAACAGAAGGGAAGCTCTGGTGATAAACTGTCACATGATGCTTCATTACATCCCAGACGAAACCCTAGAATCCGACCATTCAATATCGAACTCTTACATTTACGAATCTTCGTCGTTGCGATCGATGTTTCTGAGGGCGGTGCGGAGCCTAGAGCCGACGATTGTAGTTTTAGTAGACGAAGACGCGGATTTGACATCGAACAATCTGGAGACTAGGCTGAGGTCAGCGTTTAACTACCTGTGGATACCGTATGACACGGTGGACACCTTTTTGCCAAAAGGGAGCCGGCAACGACAATGGTACGAGGCGGATATAAGCTGGAAGATAGAGAATGTGATAGCGCAGGAAGGGTTACAGAGAGTGGAGAGGGTGGAGCCCAAGAGCAGGTGGGAGCAGAGGATGAGGAATGTCAAGTTTCAAGGGGTTGGGTTGAGTGAGGAGGGAGTTTCAGAGATGAAGGCGATGCTTGACGAGCATGCAGCTGGGTGGGGATTGAAGAAGGAAGATGAACATCTTGTTCTCACCTGGAAAGGACACAATGTCGTTTTTGCCTCTATTTGGATGCCTGCGTGA 1377 0.5142 MTQFTPSLPSLHQITTTTPFSSRNKNNQIHRTRPWPGFPSSTAFNSFGGANCMEQLLVHCANAIESDDVTLAQQILWVLNNIASPDGDSNQRLASAFNRALAARAAKSGSCKMLAVVADVAHNTNLTAIDIHSFSVIELANFVDLTPWHRFGFTAANSAILEVTEGFSVIHIVDLSSTHCMQIPTLIDAIATRHEVPPLIKLTVSASNKDIPPILNLSYDELGAKLVSFARSKNIILEFKVISSSYEDGFASLIEHLRLQQMVLVAEGNRREALVINCHMMLHYIPDETLESDHSISNSYIYESSSLRSMFLRAVRSLEPTIVVLVDEDADLTSNNLETRLRSAFNYLWIPYDTVDTFLPKGSRQRQWYEADISWKIENVIAQEGLQRVERVEPKSRWEQRMRNVKFQGVGLSEEGVSEMKAMLDEHAAGWGLKKEDEHLVLTWKGHNVVFASIWMPA 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2037 458 MobiDBLite consensus disorder prediction 1 37 - -
Acco11g2037 458 ProSiteProfiles GRAS family profile. 44 456 IPR005202 -
Acco11g2037 458 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 52 444 IPR005202 -
Acco11g2037 458 Pfam GRAS domain family 53 455 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2037 Acco-ChrAcco11 34586123 34587499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2037 38 457 GRAS Transcription Factor Family AT3G49950 57.920 3.39e-173 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco11g2037 GRAS 1.3e-92 CL0063