Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2031 ATGGGAGAACAGTCTGAGATGGTGGTGGTGCGGCAATTCGACGCCCATAAGGACCGAGAGAGAGTGGAGGCCATGGAAAAGATATGTGAGGTTGGACCCAGTGGGAAGCTCTCCCTGTTCACCGACCTCATGGGTGACCCGATTTGCAGGGTCCGCCACTCACCTGCTTTTCTCATGCTGGTCGCTGAGAAGGGGCAAGAGATTGTGGGAATGATAAGGGGCTGCATCAAAACCGTTACATGCGGAAAGAAGCTATCCAGAAATGTGAAGAAGCCCCCCTACTGGAATATCAACGACGCCGCCGAGACCTTCCAGGCCACTCCCAGATACGTCCCTGTGTACACCAAAGTCGCCTACATTCTAGGCCTCCGAGTCTCGCCTTCTCAACGGAGGATGGGAATAGGGTTGAAGCTGGTGCAGAGGATGGAGGAGTGGTTCAGAAGTAATGGGGTTGAGTACTCGTATATAGCGACGGAAAACGACAATTTAGCATCGGTTACGCTCTTCACCGACAAATGCGGATACTCCAGGTTCCGTACCCCGTCCGTCCTTGTCAATCCCGTTTACGCTCACAGAGAGAAGGTCTCTCGCAAGGTCACCATCATCCCCCTCAACTCCGATGACGCCGAATCCCTCTATCGTCGTCGCTTCGCCACCACCGAATTCTTCCCCCGCGACATTGATTCCATCCTCAAAAACAAACTCAGCCTCGGGACCTTCCTCGCCGTCCCAAGTGGGTCCCAACGCGCGGAAACATGGCCCGGGTTGGATCGCTTCCTGTCGGACCCACCAGAGTCCTGGGCAGTGCTCAGCGTGTGGAACTGCAAGGACGTGTTCACGCTCGAGGTGCGGGGCGTGTCGCGCGTGAAGCGCACCCTAGCGAAAACGACCCGAATAGTGGATCGGGCCTTGCCGTTTCTAAGACTGCCGTCGGTCCCGAACTTCTTCAGACCGTTCGGATTCCACTTCCTGTACGGACTGGGAGGCGAGGGCCCAGAAGCGGTGAAGATGGTGAAGGCGCTGTGTGGGTTCGCACATAACCTCGCCAAGGAACATGGCTGTCGGGTGGTGGCGACGGAGGTGTCGAGCCGCGATCCCCTCAAGTTGGGGATACCACACTGGAAGATGTTATCTTGCGATGAGGATTTGTGGTGCATCAAGCGGCTCGGGGAAGACTACAGTGACGGCTCTGTGGGTGACTGGACCAAATCTCCGCCCGGCTGGTCCATTTTTGTTGACCCCAGAGAGGTTTAA 1254 0.5646 MGEQSEMVVVRQFDAHKDRERVEAMEKICEVGPSGKLSLFTDLMGDPICRVRHSPAFLMLVAEKGQEIVGMIRGCIKTVTCGKKLSRNVKKPPYWNINDAAETFQATPRYVPVYTKVAYILGLRVSPSQRRMGIGLKLVQRMEEWFRSNGVEYSYIATENDNLASVTLFTDKCGYSRFRTPSVLVNPVYAHREKVSRKVTIIPLNSDDAESLYRRRFATTEFFPRDIDSILKNKLSLGTFLAVPSGSQRAETWPGLDRFLSDPPESWAVLSVWNCKDVFTLEVRGVSRVKRTLAKTTRIVDRALPFLRLPSVPNFFRPFGFHFLYGLGGEGPEAVKMVKALCGFAHNLAKEHGCRVVATEVSSRDPLKLGIPHWKMLSCDEDLWCIKRLGEDYSDGSVGDWTKSPPGWSIFVDPREV 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2031 417 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 8 189 IPR000182 GO:0016747
Acco11g2031 417 FunFam Probable N-acetyltransferase HLS1-like 17 182 - -
Acco11g2031 417 CDD NAT_SF 59 153 - -
Acco11g2031 417 Pfam Acetyltransferase (GNAT) family 53 175 IPR000182 GO:0016747
Acco11g2031 417 Gene3D - 6 187 - -
Acco11g2031 417 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 54 180 IPR016181 -
Acco11g2031 417 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2031 Acco-ChrAcco11 34516981 34518656 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Acco11g2031 Acetyltransf_1 2.4e-17 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g2031 11 34516981 34518656 Acco12g1867 12 30013693 30015205 CCT
Acco11g2031 11 34516981 34518656 Acco11g2031 11 34516981 34518656 ECH