Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2024 ATGGTTTTCGAGCAAACTCCGTCAGACGGCTCTGCAGCTTTAATTGAAGACGTGATGGCTGATGCCAAGAAAATTATTCCTCTTCCTCCTCCTTATCCCCATCCACCAGTAACCAGGTGTTCTTGCAAGGATGTACATATGAAAAATTCACCGCCAAGTGGACGTACTTGTGTTCCTGTAGCAACAAAAGAATTGTGGGAGCGTCTTTTTGATGAAGGTTATGAAGCAGATGTTTTCATTAATACTGCTAATGGTGGCATTATTTACGCGCATTCTTATATTCTTGCCATGGCTTCTCCAGTATTGAGGGGCATGCTTAAGCGAGCAAGACGTCATCGTCATATGAAATCAATCTTGATTCCAGGGGTTCCACACGGCGCTGTTCGAGTTTTCATTCGATTTTTGTATAGTTCCTGTTACGAGAAAGAAGAAATGAATGAATTCGCGTTACATTTGTTGGTTCTGTCACATGTATTTGCGATTCCCCACTTGAAGCGTGAATGTGAACAGAAGCTGGAATCGGATTTCCTCACCATCGACAATGTAGTGGATGTGTTTCAACTTGCATTACTATGTGATGCTCCCCGCCTTAGCCTCATTTGTCACCGTCGCATCCTAAAAAACTTTAAAGCAGTTTCGGGGTCTGAAGGGTGGAAGGCTATGAAAGAGAGCCATCCAACTCTAGAGAAGGAGCTTCTGGAGTCTCTTATCGATGAAGAAAATGACACAAAGGAGAGGATCAGAAAAATGAATGAGAAGAAAATCTATCTTCAATTATACGAGGCAATGGAAGCTCTGGTTCACATATATAGAGATGGGTGTCGAACCATTGGCCCACACGATAAAGACTTCAAAGAAAACCAAGCACCATGCACTTTTGCAGCCTGCAAGAGCTTAGAGTTGCTTGTCCGTCATTTTGCTGGGTGCAAGTTGAGAGTCCCTGGTGGCTGCAATCATTGCAAGAGGATGTGGCAGCTTTTGGAGCTGCACTCTCGTATATGTGCCTATCCAGATCAATGTAGGGTTCCATTATGCAGGAACTTTAAGAAGAGAATAGCAAAACAGAGCAAGAAAGATGAAGTTAGGTGGAGAATACTGGTAGAGAAGATCTTGAGAACCAAGGGCATTGCGGTAGCACCATTTTTTGAAAAGCAATGA 1158 0.4326 MVFEQTPSDGSAALIEDVMADAKKIIPLPPPYPHPPVTRCSCKDVHMKNSPPSGRTCVPVATKELWERLFDEGYEADVFINTANGGIIYAHSYILAMASPVLRGMLKRARRHRHMKSILIPGVPHGAVRVFIRFLYSSCYEKEEMNEFALHLLVLSHVFAIPHLKRECEQKLESDFLTIDNVVDVFQLALLCDAPRLSLICHRRILKNFKAVSGSEGWKAMKESHPTLEKELLESLIDEENDTKERIRKMNEKKIYLQLYEAMEALVHIYRDGCRTIGPHDKDFKENQAPCTFAACKSLELLVRHFAGCKLRVPGGCNHCKRMWQLLELHSRICAYPDQCRVPLCRNFKKRIAKQSKKDEVRWRILVEKILRTKGIAVAPFFEKQ 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2024 385 SUPERFAMILY TAZ domain 253 353 IPR035898 -
Acco11g2024 385 SMART TAZ_2 253 346 IPR000197 -
Acco11g2024 385 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 52 379 IPR044513 -
Acco11g2024 385 SUPERFAMILY POZ domain 63 174 IPR011333 -
Acco11g2024 385 SMART BTB_4 76 176 IPR000210 GO:0005515
Acco11g2024 385 ProSiteProfiles BTB domain profile. 76 144 IPR000210 GO:0005515
Acco11g2024 385 Gene3D Potassium Channel Kv1.1; Chain A 60 176 IPR011333 -
Acco11g2024 385 FunFam BTB/POZ and TAZ domain-containing protein 2 250 375 - -
Acco11g2024 385 CDD BACK 178 238 - -
Acco11g2024 385 Pfam BTB/POZ domain 68 173 IPR000210 GO:0005515
Acco11g2024 385 Gene3D - 177 251 - -
Acco11g2024 385 Coils Coil 230 253 - -
Acco11g2024 385 Gene3D TAZ domain 252 373 IPR035898 -
Acco11g2024 385 FunFam BTB/POZ and TAZ domain-containing protein 2 178 248 - -
Acco11g2024 385 ProSiteProfiles Zinc finger TAZ-type profile. 250 348 IPR000197 -
Acco11g2024 385 Pfam TAZ zinc finger 260 345 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2024 Acco-ChrAcco11 34438824 34442127 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Acco11g2024 BTB 3e-13 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g2024 11 34438824 34442127 Acco11g2024 11 34438824 34442127 ECH