Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2021 ATGGGTGTAGTTGTGGAGCTTCCTGAGGGAGGAGGCTTGAGAGCCCACACTAAAGGAGCTTCTGAAATAATTCTGGCTGCCTGTGACAAGGTTATCAATTCCAAAGGTGAGGTTGTTCCACTTGACGAAGAATCTAGGAACCGTCTTACGGTTACAATAAACCAATTTGCAAGTGAGGCACTCAGAACTCTATGCATTGCCTACATGGACATGGAAAAGGGATTCTCACCTGAAGACCCGATTCCAGTTTCTGGGTATACTTGTATTGGAATTGTTGGCATTAAGGATCCTGTTCGTCCCGGTGTTAAAGAATCAGTTGCAGTGTGTCGTTCAGCTGGTATAACAGTAAGGATGGTTACAGGTGACAACATTGATACTGCAAAGGCTATAGCTAGAGAATGTGGGATTTTAACAGATGATGGTATAGCCATTGAAGGTGCAGAATTTAGAGAGAAGAGTCAAGAGGAATTGTTCAAACTGATCCAAAAAATTCAGGTTATGGCTCGTTCTTCACCCATGGACAAGCATACATTGGTGAAACACGTACGTACCACATTTGGGGAAGTCGTAGCTGTGACTGGTGATGGAACAAATGATGCACCAGCTCTTCATGAAGCTGACATTGGACTCGCAATGGGCATTGCTGGAACTGAGGTTGCTAAAGAAAGTGCAGATGTCATCATTCTGGATGATAATTTTTCCACAATCGTGACAGTGGCAAAATGGGGACGTTCAGTTTACATAAACATCCAGAAATTTGTACAATTCCAGCTAACCGTTAATGTGGTTGCATTACTAGTGAACTTCACCTCAGCGTGCTGGACAGGAAGTACGCCCCTTACAGCTGTTCAATTACTGTGGGTGAACATGATAATGGACACACTGGGAGCCCTGGCACTTGCAACTGAACCTCCTAACGATGAATTGATGAAGCGATCACCAGTAGGAAGGACGGGTAATTTCATTAGCAACACCATGTGGAGGAACATCTTAGGCCAATCATTGTATCAGATTATGGTGATATGGTTTCTTCAGACCAGTGGAAAATTGTATTTTAACCTCAGTGGTCCTGATGCTGATCTGATCCAAAACACTAATTTTCAACGCATTTGTCTTCTGTCAGGTAAACAAGCCTCTTAA 1140 0.4333 MGVVVELPEGGGLRAHTKGASEIILAACDKVINSKGEVVPLDEESRNRLTVTINQFASEALRTLCIAYMDMEKGFSPEDPIPVSGYTCIGIVGIKDPVRPGVKESVAVCRSAGITVRMVTGDNIDTAKAIARECGILTDDGIAIEGAEFREKSQEELFKLIQKIQVMARSSPMDKHTLVKHVRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALLVNFTSACWTGSTPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRSPVGRTGNFISNTMWRNILGQSLYQIMVIWFLQTSGKLYFNLSGPDADLIQNTNFQRICLLSGKQAS 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2021 379 Pfam Cation transporting ATPase, C-terminus 278 361 IPR006068 -
Acco11g2021 379 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 1 102 IPR023299 GO:0000166
Acco11g2021 379 PRINTS H+-transporting ATPase (proton pump) signature 49 67 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco11g2021 379 PRINTS H+-transporting ATPase (proton pump) signature 225 250 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco11g2021 379 PRINTS H+-transporting ATPase (proton pump) signature 193 209 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco11g2021 379 PANTHER CATION TRANSPORTING ATPASE 1 358 - -
Acco11g2021 379 Gene3D - 98 238 IPR023214 -
Acco11g2021 379 Gene3D - 239 346 - -
Acco11g2021 379 NCBIfam HAD-IC family P-type ATPase 162 280 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco11g2021 379 FunFam Calcium-transporting ATPase 86 238 - -
Acco11g2021 379 Pfam haloacid dehalogenase-like hydrolase 89 207 - -
Acco11g2021 379 NCBIfam calcium-translocating P-type ATPase, PMCA-type 1 354 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Acco11g2021 379 Gene3D - 14 97 IPR023299 GO:0000166
Acco11g2021 379 PRINTS P-type cation-transporting ATPase superfamily signature 193 212 - -
Acco11g2021 379 PRINTS P-type cation-transporting ATPase superfamily signature 90 101 - -
Acco11g2021 379 PRINTS P-type cation-transporting ATPase superfamily signature 112 122 - -
Acco11g2021 379 PRINTS P-type cation-transporting ATPase superfamily signature 217 229 - -
Acco11g2021 379 SUPERFAMILY HAD-like 84 298 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2021 Acco-ChrAcco11 34414113 34415604 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2021 1 365 Primary Pumps ATPases AT4G37640 84.658 0.0 642