Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2014 ATGGGGAAGAAGCAGCATAGCAAGGATCGGATGTTTATCACTAAAACAGAGTGGGCGACGGAATGGGGAGGAGCCAAATCCAAAGAAAATCGTACCCCTTTTAAACGACTTCCTTTCTATTGCTGCGCGCTTACATTTACGCCGTTTGAGTATCCGGTGTGCACTGCTGATGGGAGCGTTTTTGATGTTATGAACATTACCCCGTATGTTATCAAATATGGAAAGCATCCCGTCACCGGAGCTCCGCTTAAGCAGGACGACCTCATTCCACTGACGTTCCACAAGAATTCAGATGGGGAATATCAGTGCCCTGTGCTAAACAAAGTTTTCACTGAATTCACACATATTGTAGCGGTAAAGACCACAGGAAATGTTTTCTGCTATGAGGCCATTAAAGAATTAAACATTAAGACCAAAAGCTGGAAGGAGCTCCTGACTGACGAGCCATTCACTAAGGATGACCTCATAACTATTCAGAATCCTAATGCAATTGACAGCAAGGTTCTTCTGGATTTTGATCATGTTAAAAATAATTTGAAAGTTGATGATGAAGAACTAAACAGAATGGGTTCAGATCCAACCTATAACATAAATGTGTCTGGAGATATCAAACAAATGCTTCAAGAACTTGGGACTGAGAGAGCAAAGGAAACTGCCATGCTTGGGGGAGGTGGGAGCAAGGCCCAAAAGGAAAGGGCTGCTGCACTTACTGCCATATTGGCTGCAAGGTCACGTCTGAAGGAGGATTCCAAGTCAAACGGTGATGCTAAAGCTCCTCAGGGATTTAGTATAGTAGATGCTGCTTCTGCTTCAGTGCATGGAAGAAGCGCAGCTGCTGCTAAAGCCTCATCAAGTGATAAAACTGCTGCCAGGATAGCTATGCACTTGGCTGGTGAGAGGGCTCCATTAAATGGGAAGCTGGTAAAAAGCCGATTCACAACTGGCGCTGCTTCACGATCCTTTACTTCAACATCTTTTGATCCAGTAACAGAAAATGAATATGAATATGTAAAAGTGGAGAAAAATCCAAAGAAGAAAGGTTATGTACAACTGCATACAACTCATGGTGATTTGAACATTGAGCTGCACTGTGATATAGTACCCAGGACATGTGAGAACTTTATCACACTTTGTGAGCGTGGATATTATAACGGGGTTGCATTTCATAGGAATATAAGGAATTTCATGATACAAGGTGGTGATCCTAGTGGGAGTGGGAGAGGAGGTGAATCAATATGGGGAAAACCATTTAAAGATGAAGTTAACTCCAAATTACTTCATTCTGGTAGGGGTGTCGTTAGCATGGCGAATAGTGGTCCGCACACCAATGGCTCCCAGTTTTTCATCCTGTACAAATCTGCAAATCATTTAAACTATAAACACACAGTTTTTGGCGGAGTGGTTGGTGGCTTAACAACGTTGGCGGTCATGGAAAAGGTTCCTGTTGATGATGATGATCGACCTCTGGAGGAAATCAAGATAACTAGTGTCACAGTTTTTGTCAATCCCTACACAGAACCGGATGAGGAAGACCAGGAGAAGGCTGATGAGAAGAATGTGGAGGATGAAGATAAGGATAAGGTTGGGTCATGGTATAGTAATCCTGGTGCCGGAACATCTGAATCTGGAGGCGGGGGTGGTGGTGTTGGCAAGTATTTGAAAGCCAGGAATGCTCGAGATTCTGCTACTGCTGACAATAGCACATCAGTTGTGGGAAAGAAAAGAAAAGTGGGAGTTGCCAGTGGTGAATTTAAAGACTTTTCAGCATGGTGA 1773 0.4354 MGKKQHSKDRMFITKTEWATEWGGAKSKENRTPFKRLPFYCCALTFTPFEYPVCTADGSVFDVMNITPYVIKYGKHPVTGAPLKQDDLIPLTFHKNSDGEYQCPVLNKVFTEFTHIVAVKTTGNVFCYEAIKELNIKTKSWKELLTDEPFTKDDLITIQNPNAIDSKVLLDFDHVKNNLKVDDEELNRMGSDPTYNINVSGDIKQMLQELGTERAKETAMLGGGGSKAQKERAAALTAILAARSRLKEDSKSNGDAKAPQGFSIVDAASASVHGRSAAAAKASSSDKTAARIAMHLAGERAPLNGKLVKSRFTTGAASRSFTSTSFDPVTENEYEYVKVEKNPKKKGYVQLHTTHGDLNIELHCDIVPRTCENFITLCERGYYNGVAFHRNIRNFMIQGGDPSGSGRGGESIWGKPFKDEVNSKLLHSGRGVVSMANSGPHTNGSQFFILYKSANHLNYKHTVFGGVVGGLTTLAVMEKVPVDDDDRPLEEIKITSVTVFVNPYTEPDEEDQEKADEKNVEDEDKDKVGSWYSNPGAGTSESGGGGGGVGKYLKARNARDSATADNSTSVVGKKRKVGVASGEFKDFSAW 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2014 590 SUPERFAMILY Cyclophilin-like 348 507 IPR029000 -
Acco11g2014 590 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 459 474 IPR002130 GO:0000413|GO:0003755
Acco11g2014 590 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 362 377 IPR002130 GO:0000413|GO:0003755
Acco11g2014 590 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 431 446 IPR002130 GO:0000413|GO:0003755
Acco11g2014 590 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 446 458 IPR002130 GO:0000413|GO:0003755
Acco11g2014 590 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 388 400 IPR002130 GO:0000413|GO:0003755
Acco11g2014 590 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 342 513 IPR044666 -
Acco11g2014 590 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 96 IPR013083 -
Acco11g2014 590 FunFam Peptidyl-prolyl cis-trans isomerase cyp65 329 513 - -
Acco11g2014 590 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 383 400 IPR020892 GO:0003755|GO:0006457
Acco11g2014 590 MobiDBLite consensus disorder prediction 503 576 - -
Acco11g2014 590 FunFam Peptidyl-prolyl cis-trans isomerase 2 41 96 - -
Acco11g2014 590 ProSiteProfiles U-box domain profile. 35 108 IPR003613 GO:0004842|GO:0016567
Acco11g2014 590 SUPERFAMILY RING/U-box 37 104 - -
Acco11g2014 590 Gene3D - 325 513 IPR029000 -
Acco11g2014 590 CDD RING-Ubox_PPIL2 38 110 IPR026951 -
Acco11g2014 590 CDD cyclophilin_RING 348 506 - -
Acco11g2014 590 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 348 499 IPR002130 GO:0000413|GO:0003755
Acco11g2014 590 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 352 499 IPR002130 GO:0000413|GO:0003755
Acco11g2014 590 SMART Ubox_2 39 101 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2014 Acco-ChrAcco11 34375589 34379340 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2014 1 590 U-box Gene Family AT5G67530 75.585 0.0 904
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g2014 11 34375589 34379340 Acco11g2014 11 34375589 34379340 ECH