Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2013 ATGATGGATACATTGTTTAGGCTAGTCAATTTTCAGCATCATCCTCAACAACCTGATCAATCCATCAACTCCACCGCCAGCCTCACTTCTAGCGGCTCCAAATCTTCCACACCCCAAAACTTCTACCCGCCACCACAACATCAACAACACCACCAAGAATGCTTCAACCTTTTCATGGATAATGAAGAAGACTTGTCCTCGTCTTCTTCCAAGCACTACTATAATCCCTGTAATCCCCATCACCACCCTCCTTCCTCCATCACCACCCCAACCACCACTGCCGATTTCTCCTTCTCCCCCACCACCGCTGACTTCAACTTGGAACTCTCCGGCAACGACAAGTGGGCCTCCGATCTCCTCCTCGAAACAGCTCGCGCCATCGTCGACAAAAACAGACCCCGTATCCAACAACTGATGTGGATGCTAAATGAACTCGCTTCCCCTTATGGTGACACTCATCAAAAACTCGCCTTCTACTTCCTCCAGGCCTTGTTCGCTCGCATGACTGACTCTGGCCTCCGTACGTACCGTACCTTAACCACTGCGTCTGACAAAAACTGCTCTTTTGAATCAACCAGAAAAACCGTCTTGAAGTTCCAAGAGGTAAGCCCTTGGACTACCTTCGGTCACGTCGCTTCCAATGGAGCCATATTAGAAGCCCTCGAATCAGAGCCTAAATTACACATACTCGATTTCAGCAACACATATTGCACCCAGTGGCCTACCTTTTTAGAGTCCCTAGCCACTCGCACTGACGACGCCCCTCACCTCCGTTTAACCACTGTCCTCACCACCCGACCTGGCGCTTCCGACGCGGCGGTTCAAAAAGTCATGAAGGAAATAGGTGCTAGGATGGAGAAATTCGCGCGTCTCATGGGTGTGCCATTCAAATTCAACGTCATCCATCATAACGGTGATCTTTCAGAGTTGAAATTTTCGGAATTAGATATTAAAGATGACGAGGCTTTAGCAATAAACTGCGTGAATACTTTGCATTCTGTCTCGGTCGATGGTAACAACGGTAATAATCATCGTGACGCGTTGATATCGTCGTTTCGGAGGTTACAACCTAGGATAGTTACGATAGTGGAAGAAGAAGCTGATCTTGATGTTGGGTATGATGGTTTTGAATTTGTGAATGGATTTGAAGAATGCTTGAGGTGGTTTAGGGTTTATTTTGAGGCGTTGGAGGAGAGTTTTCCGAAGACGAGTGATGAAAGGCTTATTCTTCAGAGGGAGGCCGGACGATCGGTGGTTGACTTGGTGGCGTGTGATCCGTCGGAGTCCGTGGAGCGGCGGGAGAGGGCAGGACGGTGGTCGCAGCGTATGCATGGGGTTGGGTTCAATGCGGCGTCGTTTAGTGACGAGGTATGTGATGATGTGAGGGCGCTGCTCAGAAGATACAGGGAGGGATGGTCAATGACACAGTGTCCCTCACACGCCGGAATATTCTTGTCGTGGAAGGAGCAGCCGGTGGTGTGGGCCAGTGCCTGGAGGCCTTGA 1503 0.4983 MMDTLFRLVNFQHHPQQPDQSINSTASLTSSGSKSSTPQNFYPPPQHQQHHQECFNLFMDNEEDLSSSSSKHYYNPCNPHHHPPSSITTPTTTADFSFSPTTADFNLELSGNDKWASDLLLETARAIVDKNRPRIQQLMWMLNELASPYGDTHQKLAFYFLQALFARMTDSGLRTYRTLTTASDKNCSFESTRKTVLKFQEVSPWTTFGHVASNGAILEALESEPKLHILDFSNTYCTQWPTFLESLATRTDDAPHLRLTTVLTTRPGASDAAVQKVMKEIGARMEKFARLMGVPFKFNVIHHNGDLSELKFSELDIKDDEALAINCVNTLHSVSVDGNNGNNHRDALISSFRRLQPRIVTIVEEEADLDVGYDGFEFVNGFEECLRWFRVYFEALEESFPKTSDERLILQREAGRSVVDLVACDPSESVERRERAGRWSQRMHGVGFNAASFSDEVCDDVRALLRRYREGWSMTQCPSHAGIFLSWKEQPVVWASAWRP 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2013 500 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 100 489 IPR005202 -
Acco11g2013 500 MobiDBLite consensus disorder prediction 12 50 - -
Acco11g2013 500 Pfam GRAS domain family 118 499 IPR005202 -
Acco11g2013 500 ProSiteProfiles GRAS family profile. 107 499 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2013 Acco-ChrAcco11 34370577 34372079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g2013 2 500 GRAS Transcription Factor Family AT4G37650 57.299 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco11g2013 GRAS 1.5e-104 CL0063