Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1984 ATGCTGTCCACTCTCTCTCCTTCCCACCCTTTCCTCGGCAACCCATTCTCCGCCTTTGACGGCGGCGTGACGCCGTGGGAGTTCCCGGACTTCTCCCCTGTCTTCGATCCCGTTGATCCCATCACTAATTCAAGTTCCGGCTCTGACGAACCGGATCAAACCCATGCCAAGAGAAAATCCCCGGCCTCCGATGATCAGCAGGACCGTTCGGATTCCGTCATGGAGGACCGAAAGCGGAGACGGATGATATCGAACCGGGACTCGGCGAGACGTTCGCGCATGCGGAAACAGAGGCATCTGGAGAACTTACGGAACCAAGCGAACCGGTTTAAGATGGAAAACCGAGACCTGACCAACCGGATGCAGCTCATGCTTTACCTCACTAACCGTGTACGAACCGAAAACGAGTGGCTCATGCTCGAGCGAACCATGCTCCGGCAAAAACTGACGACCCTAACTCAATATTTGGTGATCCAACAACTACGACCGTCTCATCTGCACGGCCAAACAATACTGGCATCACAGACAGAATAA 534 0.5431 MLSTLSPSHPFLGNPFSAFDGGVTPWEFPDFSPVFDPVDPITNSSSGSDEPDQTHAKRKSPASDDQQDRSDSVMEDRKRRRMISNRDSARRSRMRKQRHLENLRNQANRFKMENRDLTNRMQLMLYLTNRVRTENEWLMLERTMLRQKLTTLTQYLVIQQLRPSHLHGQTILASQTE 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1984 177 Coils Coil 86 120 - -
Acco11g1984 177 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 80 95 IPR004827 GO:0003700|GO:0006355
Acco11g1984 177 FunFam BZIP transcription factor 75 126 - -
Acco11g1984 177 MobiDBLite consensus disorder prediction 51 90 - -
Acco11g1984 177 SUPERFAMILY Leucine zipper domain 77 124 IPR046347 GO:0003700|GO:0006355
Acco11g1984 177 MobiDBLite consensus disorder prediction 30 97 - -
Acco11g1984 177 CDD bZIP_plant_GBF1 78 125 IPR045314 GO:0003700|GO:0006355
Acco11g1984 177 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 75 124 IPR004827 GO:0003700|GO:0006355
Acco11g1984 177 Pfam bZIP transcription factor 75 122 IPR004827 GO:0003700|GO:0006355
Acco11g1984 177 PANTHER BZIP TRANSCRIPTION FACTOR 44 33 159 - -
Acco11g1984 177 Gene3D - 76 129 - -
Acco11g1984 177 SMART brlzneu 73 137 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1984 Acco-ChrAcco11 34121999 34122532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1984 1 162 bZIP Transcription Factor Family AT2G22850 34.112 1.61e-27 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco11g1984 bZIP_1 1.2e-07 CL0018