Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1950 ATGGGCGAGTTAAGGACTTTGGAACAGCTCTATGATGGCAGTGATGCAGAGTTAGTGCTAACTCAGGATAGAGTTTGCGCTATATGTGGGGATGTGGGTCTGGAGGAGAAACTTGCAGTTTGCAGAAAGTGTCCTGATGGGGCAGAACACATTTACTGTATGCGCATTATGCTGGACAAAGTTCCTGAAGGCGGATGGACTTGTGAACAGTGTGCTCTAAGGACAGATGCTAAGAAACCAGAACAAGATAAAGTCAAAAAGACGACTGGAAAATTGCTAGGGCATCCACAATGGCAAGGATCTGGAAGTTCTGTAAATATTGAATCTAGGAGTGGTTCAAAAATCAAAATTAGATCTTCGTGTTCAGGTGGAAAGGGAACAAGTGATGTAACATCTCTGTTACCAGCAAAGAGGCATGGAGCCCTTTCACAAGCTCAGTCTGTGGAAAAAACAAAGACCATCAGAGTGAGGGTTGTGCCTCCAAGGTCACCCAATATGAACAAGTCTTTGCTTCAAAGGGAGACCTCCTTCATCTTGAAAAAGGGACAGATGAAAGCATACAAACAAACTAACTCTAAGCCTCAAATATCTTGCAATGCTCTGGAGAAAGCAGAGGTTCCTGACTACATATGGATGCCTGCCATTTTTAAACTCCCATGTGTGAAGATGTCTGATAAATCGTGCAGAGGTACATTTCAGTTGTACAGTAGTGAAGGACTTGAAAGCTCTTGTGATGGAATTCAAGCACATTTATCAACTTTTGCATTACGTAAAGTTCTTGAAGCAGTAGACAAGCTTCCTGAGATTATCATGCTTGAACAATTACCTCGCTTGAGGACATGGCCATCTCAATTTGTTGAACATCAAGCCATAGAAGATCATATTGCTCTATACTTTTTTGCAACAGATCTTGATAGCTATAGAACGCACTATAGTAGATTACTGGAGTGCATGACAAAGAATGATTTGGCTCTTAGAGGAAATTTTGATGGTGATGAACTATTAATTTTTCCATCCAACCTTCTGCCTGAGCAAATCCAACGTCAAAACAGTTTGTCATTCTTATGGGGTGTATTTAGAGGGCAGAAGGTTGGCAGCTCAGCGCCACTGCCAAATTCTCTGAAGGAAGAAAATAGATCCAGTGAGAAGACTCATTCATTAGATCCCAATGCTTGTCCTCAAGCAGGAGAAGACACAGGAGGAGTTGATGAAGCTGGCAAGTGCTTCAGTGTTAACAATTCCCCTGGTGAAATTCACACATTTGACAGTCCAGGTGCGAAGTCTTCTTCAGTAGAAGCAATTATCCTTGGAGGATACAGTTACAGCTCTGATACAACTGAAGTGATGCAAGCAAATGACGAAGGAGAGGTCAATTCACCAGAGGTAAATCTTGATCTTTCACTTCATGATGGTGTTGTTGTTGGGCTGTCAGATGGAGTTGGGAACCATGGAAATAATGAAGAAGCGCATGAGGAACCAGCAAGGGAAGACGATGTGGAAGCGTCGCTTTCTGGATCCTATGATCAAAATTTGGAGATGGAGGAAGGGATGGATAACGAACTCACGCTTGAGCGGCAAGCTGCGGAAACTTTGATCTTATTCTCCAAGGGATTTGGAAAGATTTAG 1626 0.4262 MGELRTLEQLYDGSDAELVLTQDRVCAICGDVGLEEKLAVCRKCPDGAEHIYCMRIMLDKVPEGGWTCEQCALRTDAKKPEQDKVKKTTGKLLGHPQWQGSGSSVNIESRSGSKIKIRSSCSGGKGTSDVTSLLPAKRHGALSQAQSVEKTKTIRVRVVPPRSPNMNKSLLQRETSFILKKGQMKAYKQTNSKPQISCNALEKAEVPDYIWMPAIFKLPCVKMSDKSCRGTFQLYSSEGLESSCDGIQAHLSTFALRKVLEAVDKLPEIIMLEQLPRLRTWPSQFVEHQAIEDHIALYFFATDLDSYRTHYSRLLECMTKNDLALRGNFDGDELLIFPSNLLPEQIQRQNSLSFLWGVFRGQKVGSSAPLPNSLKEENRSSEKTHSLDPNACPQAGEDTGGVDEAGKCFSVNNSPGEIHTFDSPGAKSSSVEAIILGGYSYSSDTTEVMQANDEGEVNSPEVNLDLSLHDGVVVGLSDGVGNHGNNEEAHEEPAREDDVEASLSGSYDQNLEMEEGMDNELTLERQAAETLILFSKGFGKI 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1950 541 SMART PHD_3 25 72 IPR001965 -
Acco11g1950 541 MobiDBLite consensus disorder prediction 367 399 - -
Acco11g1950 541 PANTHER - 25 174 - -
Acco11g1950 541 MobiDBLite consensus disorder prediction 478 504 - -
Acco11g1950 541 Pfam PHD-finger 25 72 IPR019787 -
Acco11g1950 541 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 94 IPR013083 -
Acco11g1950 541 SUPERFAMILY FYVE/PHD zinc finger 12 78 IPR011011 -
Acco11g1950 541 MobiDBLite consensus disorder prediction 484 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1950 Acco-ChrAcco11 33775206 33782348 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Acco11g1950 PHD 3.5e-07 CL0390