Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1945 ATGGCTGGTCTGGATTTAGGCACTGCTTCTCGTTTTGCTCCAAATCTTCACAGACCCAACTTGCACCTTCAGCACCAACCCGATTCCGAAGAAGATGCCAATCGGGCCGCTCCGTTTTCCTCCGAAGATGGGTCCCACCAAGGCCTCGATCTCGCCTCCGCCTCCGCGGGTTCCAGTGACATCGTCGCCCGCCGTCCCCGAGGCCGTCCAGCCGGTTCAAAGAACAAGCCGAAGCCGCCCGTCATCATTACCAGAGAAAGCGCCAACACGCTCCGGGCCCATATTCTAGAAGTGGCCAGTGGATCCGATGTGTTTGACTCCGTCGCCACCTACGCGCGCCGCCGCCAGCGCGGGATCTGTATTCTGAGCGGCAGTGGCACCGTCACCAATGTGACGTTGCGGCAGCCGGCTGCCGCGGGAGCCGTGGTTACACTTCATGGAAGGTTCGAGATATTGTCGCTGTCGGGGTCGTTCCTGCCGCCGCCGGCCCCACCAGGCGCGACAAGCCTGACGGTGTACTTGGCGGGAGGGCAAGGACAAGTTGTGGGAGGATGTGTAGTGGGAGAGTTGACTGCAGCGGGACCCGTCATGGTGATCGCTTCTTCGTTTACAAACGTGGCGTACGAAAGGTTGCCGCTGGATGAGCAGGAGGAGCAACTCCAGATGCAACCGCCCGCGGTAACTTCTTCTCAAGGTTCGGCCACGGCCGCGGCTTTCCCAGACCCATCCTCCGGTCTACCGTTCTTCAATTTGCCCCTTAATATGCAGATTCCGGTGGAAGGCTGGGCCGGCAACTCAGCCCCTCGTCCTCCATTTTGA 819 0.6032 MAGLDLGTASRFAPNLHRPNLHLQHQPDSEEDANRAAPFSSEDGSHQGLDLASASAGSSDIVARRPRGRPAGSKNKPKPPVIITRESANTLRAHILEVASGSDVFDSVATYARRRQRGICILSGSGTVTNVTLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTVYLAGGQGQVVGGCVVGELTAAGPVMVIASSFTNVAYERLPLDEQEEQLQMQPPAVTSSQGSATAAAFPDPSSGLPFFNLPLNMQIPVEGWAGNSAPRPPF 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1945 272 FunFam AT-hook motif nuclear-localized protein 91 219 - -
Acco11g1945 272 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 34 228 IPR014476 GO:0003680
Acco11g1945 272 MobiDBLite consensus disorder prediction 1 81 - -
Acco11g1945 272 MobiDBLite consensus disorder prediction 23 37 - -
Acco11g1945 272 Pfam Plants and Prokaryotes Conserved (PCC) domain 92 205 IPR005175 -
Acco11g1945 272 ProSiteProfiles PPC domain profile profile. 88 225 IPR005175 -
Acco11g1945 272 Gene3D - 91 224 - -
Acco11g1945 272 CDD DUF296 92 175 IPR005175 -
Acco11g1945 272 SUPERFAMILY AF0104/ALDC/Ptd012-like 88 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1945 Acco-ChrAcco11 33709266 33710084 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1945 1 272 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 65.101 5.74e-102 297