Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1943 ATGCATCCTCGGGAGCCCCCTCAGTCTTCGCCACCTTCACGCTCACAACAACGACATTCATCGGCGCCACCACCAAACATTATGATGCATCCTGGTTCTTTTCCCGCCACCATGCCCAACCGTATCACTTCTTCCTTGATCAACCCCAATTCCTCGACCATGTTGATGGACCCTGCCACCGGCCGGTTTCAGTTCCCCACATTCGCATCACATTCCCGTTCTACTCCACCTCCTGCCCCTCCCTTTCCTTTGCCTCCATCGAACCCTTCAGAACCTCTGAGAACCACCACTTCTCCTTACGAAGGCCCCTCCTCTGGTATTGATGCTCCGAAGAAGAAGAGAGGCCGGCCCAGCAATTATTCGTGGGATGGTAGCACTGATTTGGTTTTGGGTCCTACGCCTTTGTCTTCTATTCCCCCCGCTGATTTGGACCCCCCGTCAGATGAACCACCAGCTAAAAGGGGCAGGGGAAGGCCGCCAGGCTCTGGAAAGAAGCAACTGGATGATCTTGGAGATGGCGGGACATTCTTTACTCCACATGTAATCTTGGTGAACATTGGGGAGGACCTTGCAGCAAAGATTACGTCCTTTGGTGAAAACGGGGCACGTGTGGTCTGTATTCTTTCTGCTCATGGTGCAGTCAGCAATGTCACCCTTCGACAACCAGCTACTTGTGGTGGTACAGTGCACTACGAGGGTCGATATGAGATTTTATCTTTATCCGGTTCTTTCAATCCATCTGGAGAGGGTGGTCCTAGAACAGGCGGTATTACTGTTGCACTTGCCGGGACCGATGGAAAATTGGTGGGTGGTAGGGTTTCTGGAAGGCTTGTTGCGGCATCAGAAATACAGGTCATTGTGTTTAGTTTTATTGAGAAGAAGAAAAAGTCGAGCCCAAAGGAGCAATCAGGGCCCCCCCCACCAGCCCCAGGAACTCAAGTGTTGAATTCTGGCTCTTCATCTGTGACTCTAACCGATGATAAATCTCAAGGGGCTTCAAGTATTTCCTCTGATGAAAATGACGATAGTTCCTTGCAAAGGGGATCTGCATCTGCATCTGGGCCTGGATTCGATGGCAGTGGTAGCCAGCCCATTCAAAATATGCAGTGGAAGCAAATATGGCGTACGCCGCGATGA 1137 0.5128 MHPREPPQSSPPSRSQQRHSSAPPPNIMMHPGSFPATMPNRITSSLINPNSSTMLMDPATGRFQFPTFASHSRSTPPPAPPFPLPPSNPSEPLRTTTSPYEGPSSGIDAPKKKRGRPSNYSWDGSTDLVLGPTPLSSIPPADLDPPSDEPPAKRGRGRPPGSGKKQLDDLGDGGTFFTPHVILVNIGEDLAAKITSFGENGARVVCILSAHGAVSNVTLRQPATCGGTVHYEGRYEILSLSGSFNPSGEGGPRTGGITVALAGTDGKLVGGRVSGRLVAASEIQVIVFSFIEKKKKSSPKEQSGPPPPAPGTQVLNSGSSSVTLTDDKSQGASSISSDENDDSSLQRGSASASGPGFDGSGSQPIQNMQWKQIWRTPR 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1943 378 MobiDBLite consensus disorder prediction 37 58 - -
Acco11g1943 378 CDD DUF296 178 290 IPR005175 -
Acco11g1943 378 MobiDBLite consensus disorder prediction 147 165 - -
Acco11g1943 378 SUPERFAMILY AF0104/ALDC/Ptd012-like 176 306 - -
Acco11g1943 378 ProSiteProfiles PPC domain profile profile. 174 311 IPR005175 -
Acco11g1943 378 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 84 343 IPR039605 GO:0003680
Acco11g1943 378 MobiDBLite consensus disorder prediction 73 92 - -
Acco11g1943 378 Gene3D - 179 306 - -
Acco11g1943 378 MobiDBLite consensus disorder prediction 313 378 - -
Acco11g1943 378 Pfam Plants and Prokaryotes Conserved (PCC) domain 179 291 IPR005175 -
Acco11g1943 378 MobiDBLite consensus disorder prediction 1 172 - -
Acco11g1943 378 MobiDBLite consensus disorder prediction 295 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1943 Acco-ChrAcco11 33696512 33699615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1943 106 318 AT-hook Motif Nuclear Localized (AHL) Family AT4G17950 47.967 9.59e-56 187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1943 11 33696512 33699615 Acco12g1776 12 28910691 28916150 CCT