Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1933 ATGGGGAGCGGACTTTCTAGCCTCCTTCCTTGCTGCAAACCGGCTAACCGGACCTCCAGTCAGCCGGATCAACAGGAAGTGATCTTTGCCGCCACTGAGCCCTTGGATGATGAAACCCTAGGCCACTCCTTCTGCTACGTTAGATCTTCTGCTCGCTTTCTTTCCCCCACTCAGTCGGATCGATTCGTCTCGCCTTCTAACTCCCTCCGCTTTTCTCCATCTCATGAACCCGTATCGAGAACCCGACCCGATTTGCCCGAAACCGTCTTCAAGGCCATTTCCGGAGCTTCCGTCAGCGCCAACAGTTCCACTCCCAAAACTGTTCTCCAGCTGGACAATATCCACGATGATGTTGCCGACTGTGCCGCTGGTGGTGGCGCGAGGGGGAACATTGTGAATGGCTTCGAGAGCACATCGTCGTTTAGTGCTCTCCCGCTTCAGCCAGTTCCCCGGGGGGGTGACCCCTCAGGTCCGGTAGATAGGGGAGCCTTCTTTCTATCTGGCCCAATTGAGCGCGGTGCCCTCTCTGGGCCTCTCGAACCCAGCGCCAACACCGAAGGTGGAGGCGGCGTTCCTTTCTCGGCGCCTCTTGGTGGCTTTTATGTCAAAAAGAAGCGGAAGAGGAGCATTTCAGGGTTTCGGAAGGCATTCCATGGGAACCTTTCGGAGAAGAAGCGGCCGTGGGTTGTGCCAGTGTTGAATTTCGTAGGTAGAAAGGATGTTCCGCCAAGCGAAGAGAAATCGGAGATAAAGAGTGAGAGTAATGTACAGTGGGCACATGGGAAGGCGGGAGAGGATCGGGTACATGTAGTTGTCTCGGAAGAGCACGGCTGGTTGTTTGTTGGGATATACGACGGCTTCAATGGCCCTGACGCGCCGGAATTTCTGATGGGTCATCTTTACCGTGCAGTGTACAATGAATTACAGGGTCTGTTTTGGGAAGCTGAAGAAGCGGAGGAAACTAACCCATCGACCGCGCCTGCCGAGAATGCATTACCTGGAGAACAATCTGAACCATCGATTGAAATCTCCCACAGAGACTTAACAGATGAGGCGGACGTAACTGTGAGTAGAGAGGACTTGAATTCTTTGCCGGTTGATCGAGAGTCAGCAAAGAGAGTAACGTTTCAAGCAGACGGAACGGAAAGTAGGCGGCGTAGGTTATGGGAGTTACTCGCCGAAGCTGATGCAGAAGACGGGCTTGATCTTTCAGGGTCAGATAGATTTGCATTTTCCGTTGATGATGCCCTGAGCGTAAGCAATGCGGGATCAGCAGTTAGCAGACGGTGGCTATTATTATCGAAGTTGAAACATGGATTATCAAAACATAAGGAAGGTCAAGGTAGCAAGTTGTTTCCCTGGAAACTCGGCACAGAAGATAAAGAGAAGGTTGAGGTAGAAAATCGGGCTGAAGAAAGGCCATCCCGTGGAAACAGGAGGCGGAAAGTGGGTCCCGTGGATCATGATTCGGTCTTGAGAGCTCTATCTCGAGCTCTTGAATTGACCGAACTTGCATACTTGGATATGACGGATAAGATTCTTGATACAAACCCGGAGATCGCTTTAATGGGGTCATGTCTGCTAGTTGTTTTAATGAGGGATGAAGATGTGTACGTGATGAATGTGGGAGATAGCCGAGCCATTGTTGCACAATTTGAGCCCAAAGAGCTTGATTCTAGCGTGGAATTGGAGAACAAAGGAGATAAGGGGTCAAGCACAGAGAGCATAGTTGAGGAGTCCTTAACTGCCGGTGAAAGCGCAAACAAGGCGGGGATTGAGGGTCCTGCTCAAGAAATGAGGTTGATTGCATTGCAGCTGTCCACTGATCACAGCACGAGCATTGAAGAGGAAGTCATTAGGATTAAGAATGAACATCCAGATGACAACCAATGCATTGTAAATGACAGAGTTAAAGGTCGTCTTAAGGTTACCAGGGCATTTGGGGCAGGATTTTTGAAACAGCCAAAGTGGAATGATCCTCTACTGGAAATGTTTCGTAATGAATATATTGGCACCGCTCCATATATATCCTGCTGCCCTTCACTACGTCATCATAGATTATGCCCAAGAGATCAGTTCTTGATCCTCTCATCTGATGGGTTATATCAATATCTAAGCAATCAAGAAGTGGTTTCTCAAGTTGAGAGCTTCATGGAAAAGTTTCCTGATGGAGATCCTGCTCAACATTTGATTGAGGAGCTTCTCCTCCGTGCCGCTAAGAAAGCTGGAATGGATTTACATGACTTGTTGGATATCCCACAAGGAGATAGGAGGAAATACCATGATGATGTTACCGTCATGGTGATATCACTTGAGGGTCGAATCTGGAAATCATCAGGAAAGTATCTGTGA 2352 0.4915 MGSGLSSLLPCCKPANRTSSQPDQQEVIFAATEPLDDETLGHSFCYVRSSARFLSPTQSDRFVSPSNSLRFSPSHEPVSRTRPDLPETVFKAISGASVSANSSTPKTVLQLDNIHDDVADCAAGGGARGNIVNGFESTSSFSALPLQPVPRGGDPSGPVDRGAFFLSGPIERGALSGPLEPSANTEGGGGVPFSAPLGGFYVKKKRKRSISGFRKAFHGNLSEKKRPWVVPVLNFVGRKDVPPSEEKSEIKSESNVQWAHGKAGEDRVHVVVSEEHGWLFVGIYDGFNGPDAPEFLMGHLYRAVYNELQGLFWEAEEAEETNPSTAPAENALPGEQSEPSIEISHRDLTDEADVTVSREDLNSLPVDRESAKRVTFQADGTESRRRRLWELLAEADAEDGLDLSGSDRFAFSVDDALSVSNAGSAVSRRWLLLSKLKHGLSKHKEGQGSKLFPWKLGTEDKEKVEVENRAEERPSRGNRRRKVGPVDHDSVLRALSRALELTELAYLDMTDKILDTNPEIALMGSCLLVVLMRDEDVYVMNVGDSRAIVAQFEPKELDSSVELENKGDKGSSTESIVEESLTAGESANKAGIEGPAQEMRLIALQLSTDHSTSIEEEVIRIKNEHPDDNQCIVNDRVKGRLKVTRAFGAGFLKQPKWNDPLLEMFRNEYIGTAPYISCCPSLRHHRLCPRDQFLILSSDGLYQYLSNQEVVSQVESFMEKFPDGDPAQHLIEELLLRAAKKAGMDLHDLLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1933 783 CDD PP2Cc 487 771 IPR001932 -
Acco11g1933 783 SUPERFAMILY PP2C-like 261 772 IPR036457 -
Acco11g1933 783 Gene3D - 237 778 IPR036457 -
Acco11g1933 783 MobiDBLite consensus disorder prediction 316 339 - -
Acco11g1933 783 SMART PP2C_4 249 769 IPR001932 -
Acco11g1933 783 MobiDBLite consensus disorder prediction 465 484 - -
Acco11g1933 783 PANTHER PROTEIN PHOSPHATASE 2C 246 770 IPR015655 GO:0004722|GO:0006470
Acco11g1933 783 MobiDBLite consensus disorder prediction 1 23 - -
Acco11g1933 783 Pfam Protein phosphatase 2C 605 739 IPR001932 -
Acco11g1933 783 ProSiteProfiles PPM-type phosphatase domain profile. 249 771 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1933 Acco-ChrAcco11 33628491 33633704 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1933 1 783 PP2C-type Phosphatase Gene Family AT2G35350 58.120 0.0 846