Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1929 ATGGGTTGCTTAAACTCTAAAACAGCTCATCTTCACTCCCCTGATGACCCCTCTGCTTTCCCTTACGCCAATAAACCTGATCCAGCAAATGGCGATGATGTTGATCAAGAATGCCAAGTTCCAGCATTCAAAGAGTTCGGTCTCATTGAACTTCGAAGGGCTACGAACGAGTTCAGCACAAATTACATAGTGTCGGAAAGTGGCGAGAAAGCTCCCAATGTGGTCTACAAGGGAAAGCTCGAGAACAATCGCTTAGTTGCTATTAAACGCTTCTCTAAACAGTCTTGGCCTGACGCTCAGCAGTTTATGGCAGAAGCAGCTGGAGTTGGTAAAGTGAGGCACAAGAGATTGGTGAATCTAATTGGTTGCTGTGCTGAAGGAGACGAACGGCTTTTGGTTGCAGAGTACATGCCAAATGATACATTATCAAAGCATCTTTTTCATTGGGACAAGCAGCCATTGCCATGGGAAATGCGTGTAAGAGTTGCATACCATGTAGCCCAAGCACTAGATCACTGTAGCATGGAAAATCGCAAAATATATCATGATTTGAATGCATACAGGATTCTTTTTGATGAGGAAGGTGACCCCCGATTGTCAAGTTTTGGGCTTATGAAAAATAGTCGAGATGGGAAAAGCTACAGTACCAACTTAGCATATACTCCACCTGAGTTTTTGCGGACAGGCAGGATTATACCAGAGAGTGTAATCTACAGTTATGGAACAGTTCTTTTGGATCTCTTGAGCGGCAAGCATATTCCTCCAAGCCATGCTCTTGATCTGATTAGGGGTAAAAATGCCTTGTTGCTGATGGATTCGTCCCTAGAAGGGCAATACGCAAATGATGATGCTACCAAGTTGGTTGAACTTGCTTCAAAATGTCTTCAGTTTGAGGCTAGAGAACGCCCTGATATTAAGTTTCTTCTTACAGCAGTTGCTCCTCTTCAAAAGCAGAAAGAGGTAGCATCTCATGCGTTGATGGGCCTGACTAAAAATACAACAGTGCTACCAACCATGCTTTCACCCCTAGGAAAGGCTTGTGCGAGGATGGATCTCACGGCTGTGCATGATATATTGCTAAAAACTGGTTATAAAGATGAAGAAGGTGCTGAGAATGAGCTTTCATTCCAAGAGTGGACACAACAAGTGCAAGATATCTTGAACACTAAAAAATTTGGGGACATTGCATTCAGAGACAAGGATTTCAAGAACGCAATTGAGTATTATTCTAAGTTGGTAGTGATGATGTCAGTTCCATCGGCTACGGTATTTGCAAGAAGAGCGTTCTCATACTTGATGAATGAGCAAGCAGAGCTGGCATTACGGGATGCAATGCAGGCACAGGTGTGCATTCCTGATTGGCCAACAGCGTTCTACCTGCAGGCACTTGCTCTGTCCAAGCTGGGAATGGAGACTGATGCTCAGGATATGCTCAACGATGGGGCTGCTTTTGAAGCCAAGAGATCTAACAGTTGGCGTGGTTAA 1485 0.4418 MGCLNSKTAHLHSPDDPSAFPYANKPDPANGDDVDQECQVPAFKEFGLIELRRATNEFSTNYIVSESGEKAPNVVYKGKLENNRLVAIKRFSKQSWPDAQQFMAEAAGVGKVRHKRLVNLIGCCAEGDERLLVAEYMPNDTLSKHLFHWDKQPLPWEMRVRVAYHVAQALDHCSMENRKIYHDLNAYRILFDEEGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRIIPESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNALLLMDSSLEGQYANDDATKLVELASKCLQFEARERPDIKFLLTAVAPLQKQKEVASHALMGLTKNTTVLPTMLSPLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDILNTKKFGDIAFRDKDFKNAIEYYSKLVVMMSVPSATVFARRAFSYLMNEQAELALRDAMQAQVCIPDWPTAFYLQALALSKLGMETDAQDMLNDGAAFEAKRSNSWRG 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1929 494 Pfam Protein tyrosine and serine/threonine kinase 74 309 IPR001245 GO:0004672|GO:0006468
Acco11g1929 494 ProSiteProfiles Protein kinase domain profile. 61 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1929 494 Gene3D Transferase(Phosphotransferase) domain 1 138 330 - -
Acco11g1929 494 Gene3D Phosphorylase Kinase; domain 1 32 136 - -
Acco11g1929 494 FunFam probable serine/threonine-protein kinase At4g35230 384 493 - -
Acco11g1929 494 Gene3D Tetratricopeptide repeat domain 384 493 IPR011990 GO:0005515
Acco11g1929 494 SUPERFAMILY Protein kinase-like (PK-like) 45 311 IPR011009 -
Acco11g1929 494 FunFam probable serine/threonine-protein kinase At5g41260 138 329 - -
Acco11g1929 494 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 32 489 IPR045845 GO:0004672|GO:0009742
Acco11g1929 494 FunFam probable serine/threonine-protein kinase At4g35230 33 136 - -
Acco11g1929 494 SUPERFAMILY TPR-like 385 483 IPR011990 GO:0005515
Acco11g1929 494 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1929 Acco-ChrAcco11 33573915 33578326 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1929 14 315 Glycoside Hydrolase AT3G07070 33.846 4.64e-43 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Acco11g1929 PK_Tyr_Ser-Thr 4.7e-28 CL0016