Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1897 ATGAAGTGCTTCTTCTGCTTTAAAAGAGGATCAAAATCCTCCTCAGAATCGCAGAAACGAAGACAGAAGAACCATTCGGGTTCAAATCACGCGGTGAGTCCAACGAGTTCGCTACCATCGCGGAGAACCATAGCAGAATTGTACAAAGAGAAAGAGCACGATCTGAGAGTTTTCACTTTCCCGGAGCTCAGTGAGGCCACAAATGATTTCAATCGGATGCAGAAGATTGGAGAGGGGGGTTTCGGGAGCGTTTATCAAGGAACAATTAGGCCTCAAGATGGTCGAGGTGATCCTACTGTTGTTGCAATAAAAAGGCTTAACACCGGTGGCTTGCAGGGGCATAAAGAATGGTTGGCAGAGGTTCAATTTCTGAGCATTGTTAATCACCCAAATTTGGTAAAACTATTGGGATACTGCTCTGAAGATGGAGAAAGAGGAATCCAACGGCTGTTAGTTTATGAGTTCATACCCAACAGGAGCCTGGAGGATCATCTTTTCAGACGGATTTTTCCCAGCTTACCGTGGAAAACGAGATTGCAGATCATGCTCGGTGCTGCTCAAGGATTACTTTATCTACATGAGGAATTAGAGATTCAGGTAATATACCGAGATTTCAAATCTTCCAATGTTTTATTGGACACGAACTTCCATCCAAAGCTTTCAGATTTTGGTCTTGCCAGGGAAGGTCCAATTGGTGATCAGACCCATGTGTCCACTGCGGTGGTGGGGACGCATGGATATGCTGCCCCAGAATATATTGAAACGGGCCACCTCAAAGTTCAGAGTGATATATGGAGCTTTGGTGTGGTATTATATGAGATGCTTACAGGGAGGCGATCATTAGATAGAAGACAAGGGAAAGAACAGAAGCTTCTAGAATGGGTTAAACTGTATCCTGCTGATAGTAGGAGGTTCAGCATGATTATGGACCCTCGACTCAGGAATGAGTATTCACATGGTGCTGCTCGCCAAGTAGCCAAGTTGGCAGACAGATGCTTAAACAAGAAACCTGAAGAAAGGCCATCCATGAGTCAGGTTGTGGAAAGCTTGAAGCAAGCATTGCAGGATTCTGAAAGTTCAAAAAAGGCTTCTGAATCATCTCGACCTAAATTGATCCCAAGAAGCAAATAA 1131 0.4439 MKCFFCFKRGSKSSSESQKRRQKNHSGSNHAVSPTSSLPSRRTIAELYKEKEHDLRVFTFPELSEATNDFNRMQKIGEGGFGSVYQGTIRPQDGRGDPTVVAIKRLNTGGLQGHKEWLAEVQFLSIVNHPNLVKLLGYCSEDGERGIQRLLVYEFIPNRSLEDHLFRRIFPSLPWKTRLQIMLGAAQGLLYLHEELEIQVIYRDFKSSNVLLDTNFHPKLSDFGLAREGPIGDQTHVSTAVVGTHGYAAPEYIETGHLKVQSDIWSFGVVLYEMLTGRRSLDRRQGKEQKLLEWVKLYPADSRRFSMIMDPRLRNEYSHGAARQVAKLADRCLNKKPEERPSMSQVVESLKQALQDSESSKKASESSRPKLIPRSK 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1897 376 MobiDBLite consensus disorder prediction 334 376 - -
Acco11g1897 376 MobiDBLite consensus disorder prediction 27 41 - -
Acco11g1897 376 CDD STKc_IRAK 76 352 - -
Acco11g1897 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Acco11g1897 376 Gene3D Phosphorylase Kinase; domain 1 42 155 - -
Acco11g1897 376 SUPERFAMILY Protein kinase-like (PK-like) 53 350 IPR011009 -
Acco11g1897 376 PANTHER OS01G0588500 PROTEIN-RELATED 22 354 - -
Acco11g1897 376 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 156 364 - -
Acco11g1897 376 ProSiteProfiles Protein kinase domain profile. 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1897 376 ProSitePatterns Protein kinases ATP-binding region signature. 76 104 IPR017441 GO:0005524
Acco11g1897 376 MobiDBLite consensus disorder prediction 361 376 - -
Acco11g1897 376 MobiDBLite consensus disorder prediction 345 360 - -
Acco11g1897 376 MobiDBLite consensus disorder prediction 7 41 - -
Acco11g1897 376 Pfam Protein kinase domain 70 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1897 376 Gene3D Transferase(Phosphotransferase) domain 1 156 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1897 Acco-ChrAcco11 33195272 33197089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1897 1 350 Glycoside Hydrolase AT3G07070 42.623 3.89e-92 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Acco11g1897 Pkinase 2e-48 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1897 11 33195272 33197089 Acco12g1719 12 28331822 28334077 CCT