Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1883 ATGCTTGCTGTGCGATCTTGGGAGAAACTTGTGAAGGTGGATATGGAGGAACGGTATGAGCCACTGAAAGAACTTGGTTCTGGGAATTTTGGAGTGGCCAGGTTGGCGAGAGACAAGATCACCAAGGAGCTTGTTGCTGTCAAGTACATAGAAAGAGGGAAACAGATTGACGAGAAAGTTCAGAGGGAGATCATTAACCATCGATCTTTAAGGCATCCAAATATTATCAAGTTTAGAGAGGTCTTGCTGACCCCAACTCATTTAGCTATTGTCATGGAGTATGCTGCAGGCGGTGAAATCTTTGAGAGAATTTGCAATGCTGGTCGATTCAGTGAAGATGAGGCAAGATTTTTCTTCCAGCAACTTATATCTGGAGTTAGCTACTGTCACTCAATGCAAATTTGTCACAGAGATTTGAAATTGGAGAACACTCTCTTGGATGGAAGTCCAACACCTCGACTCAAAATATGTGACTTCGGTTACTCCAAGTCTGCTATACTGCACTCTCAACCAAAATCTACTGTTGGAACTCCTGCTTACATTGCTCCGGAGGTTCTGTCACGAAAGGAGTACGATGGAAAGATTGCGGATGTTTGGTCATGTGGTGTGACGCTTTATGTCATGTTAGTGGGAGGATACCCATTTGAAGATCCTGAAGATCCTAGGAATTTCCGAAAGACCATTGGAAGAATAATGAGTGTTCAATACTCCATTCCCGACTATGTACGTGTCTCTGCAGATTGCAGACATCTTCTTTCTCGCATCTTTGTTGCCGATCCTGCCAAAAGGATAACGATCCCAGAGATAAAACAGCACCCTTGGTTTTTGAAGAACTTGTCTAAAGAGATAAAGGAAGATGAGAAAAAGGTCGATGAGGAAGGTGCAGAGAAAGATCATCCGGGCCAGAGTGTTGAAGAAATAACGAGAATCGTACAAGAGGCAAGGACGCCGGGGAAAGAATCCAAGGGCGGGGGGCAAGCTGGTGGCGGAGGAGGATCATTGGGCGGTGAGGATGATGATGAAGAAGAACAGGAACTTGATGTTAGTGGTGAATATACTGCAACAACATAA 1071 0.4444 MLAVRSWEKLVKVDMEERYEPLKELGSGNFGVARLARDKITKELVAVKYIERGKQIDEKVQREIINHRSLRHPNIIKFREVLLTPTHLAIVMEYAAGGEIFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSPTPRLKICDFGYSKSAILHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGGYPFEDPEDPRNFRKTIGRIMSVQYSIPDYVRVSADCRHLLSRIFVADPAKRITIPEIKQHPWFLKNLSKEIKEDEKKVDEEGAEKDHPGQSVEEITRIVQEARTPGKESKGGGQAGGGGGSLGGEDDDEEEQELDVSGEYTATT 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1883 356 PANTHER SERINE/THREONINE KINASE 17 302 - -
Acco11g1883 356 Pfam Protein kinase domain 19 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1883 356 MobiDBLite consensus disorder prediction 287 356 - -
Acco11g1883 356 FunFam Serine/threonine-protein kinase SRK2E 95 283 - -
Acco11g1883 356 Gene3D Phosphorylase Kinase; domain 1 3 94 - -
Acco11g1883 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Acco11g1883 356 CDD STKc_SnRK2 18 274 - -
Acco11g1883 356 MobiDBLite consensus disorder prediction 287 304 - -
Acco11g1883 356 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Acco11g1883 356 FunFam Serine/threonine-protein kinase SRK2E 13 94 - -
Acco11g1883 356 Gene3D Transferase(Phosphotransferase) domain 1 95 283 - -
Acco11g1883 356 ProSiteProfiles Protein kinase domain profile. 19 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1883 356 SUPERFAMILY Protein kinase-like (PK-like) 12 280 IPR011009 -
Acco11g1883 356 Coils Coil 276 296 - -
Acco11g1883 356 SMART serkin_6 19 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1883 Acco-ChrAcco11 33088572 33091384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1883 18 292 CBL-interacting serine-threonine protein kinases AT5G25110 42.308 6.52e-68 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Acco11g1883 Pkinase 2.3e-71 CL0016