Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1881 ATGGGTCGTAAACCTCACGACCCAGAGCCTACGCTTCCTGATCGCTTGATCCTCCTTTTGGTTTGCCTGGTTTCGTGCGGTTTGGTCTACGCCTTTGTGTCAGTAGTGCTCACAAACTCAGGGAACTCTTCCGTTTCAGAGTTGGTTGGAGATGGCGTGACAATGGAGAATTCTGTGGAAGGTAATGGGGGATGCTGTAGAGGAATTGAAAATCTTGAACTATGGGGAACCGCTGTTAAGTGGGGTTCTCAGTTTAAATTTAATAATTCCGAAGATTGCTGCAACGCTTGTAAATCCATGTGTACTGGGAACGATGGACCTTGTCTCTGTGATTCGTGGGTGTTTTGTGGGAATCGTGAGACTTGCGGATCCAAGTTCGGTGAGTGCTGGTTGAAGAAACAAAAGGACATCTTGGCCCCTGAACGACAAGATGCTGGGGAAAAAATGACTTGGACTTCTGGTCTCGTCTTTGGAAAAGGAGAAGGTATCATTGAATTGGAAACAGAACATGGAGCTCTTCGCATCAAACTTTTCCCTGATTGTGCTCCACACTCAGTTGCCTACATTCTAGAGTTGCTGTCTTTGCACCATTGTGCAGGGTGCCACTTTTATCGTGCAGAAGGCCGAGGCGAGTCATGGGATTCGGAAGGAAACCACCTAAAAAATACTCCTTTTGGCCCCCCTTCTGCATTAATTCAAGGAACCTTAGAAGCTCAGGGAAACCCATTTAAGAAAATTCCAGCAGAACACTGTCCAACAATAGGAAGGGGTTCAGTTGCTTGGGTTAATTCAGGACCAGAATTCTTTATAAGCCTTGCTAACCATGGGGAGTGGAAAAAGGCATACACTGTTTTTGGTTCTGTTCTTCCAGAAAACATGGGTATAGCCGAGAAAATTGCTGCACTCCCCACAGTTTCTGATGTTTGGAACAAGATTAATGTTTCTGTCTTGGAAAAGGCCGTTCCCTTGTCGCTACGAAGAATCCAGAAAAGCCTTGCAGATATTAGCACTTTTGCAAATTCAGATTAG 1029 0.4538 MGRKPHDPEPTLPDRLILLLVCLVSCGLVYAFVSVVLTNSGNSSVSELVGDGVTMENSVEGNGGCCRGIENLELWGTAVKWGSQFKFNNSEDCCNACKSMCTGNDGPCLCDSWVFCGNRETCGSKFGECWLKKQKDILAPERQDAGEKMTWTSGLVFGKGEGIIELETEHGALRIKLFPDCAPHSVAYILELLSLHHCAGCHFYRAEGRGESWDSEGNHLKNTPFGPPSALIQGTLEAQGNPFKKIPAEHCPTIGRGSVAWVNSGPEFFISLANHGEWKKAYTVFGSVLPENMGIAEKIAALPTVSDVWNKINVSVLEKAVPLSLRRIQKSLADISTFANSD 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1881 342 FunFam Predicted protein 159 322 - -
Acco11g1881 342 Gene3D - 156 321 IPR029000 -
Acco11g1881 342 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 164 308 IPR002130 GO:0000413|GO:0003755
Acco11g1881 342 SUPERFAMILY Cyclophilin-like 159 316 IPR029000 -
Acco11g1881 342 PANTHER EXPRESSED PROTEIN 1 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1881 Acco-ChrAcco11 33076407 33078780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1881 159 289 U-box Gene Family AT5G67530 28.261 8.33e-08 52.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1881 11 33076407 33078780 Acco11g1881 11 33076407 33078780 ECH