Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1880 ATGACTTCCAGCATCGGAGGAAGCGATTTAGCTGAGGTATCTTGTGAGTCTGCAACAACCATGGACTTGTTTCCTACCAAGGAGAACAGCAGAACACCACAAAACTTTTCTACAATGAACTTATTTTCGCATCTCTCTATAGAAGAGATTCCAAAGATGGCAAATTCTAGTGTATGGAAGCCTGTCACTAAGGAGCCTAGAGCTGCACAGATGACAGTCTTTTATGGTGGCCAAGTTGTTGTGTTCGATGATTTTCCTGCCGAAAAAGTTATGGAGATCTTGGCCTTTGCCAGCAAAGGAACGCCCCTTATACAGAACAGCTTTGGTTATGCTTTTCCTCAGAGCCAGCCATCATTTCCTCATAATGCAACTATATTTTCTTCTGATTCCCAAAAGCCAGTGTCTCCTAATGTAAATATCGTTCCTAATATTTGCAACACTTTGGTTCAAGGGCGCCCTCAGTCACCATCTGGACCTGTGGTTGGTGACCTTCCGATTGCTAGGAAAGCATCACTTCACCGGTTCTTAGAGAAGAGGAAGGGCAGGATTGCTGCTAGAGCACCGTATCAAACAAGCAACCCCATGGTAGCTCCAAATAAGTCAACTGAATCTGTGACATGGCTTGAATTGGCTGCAAAGCCGACCAACATCTGA 654 0.4465 MTSSIGGSDLAEVSCESATTMDLFPTKENSRTPQNFSTMNLFSHLSIEEIPKMANSSVWKPVTKEPRAAQMTVFYGGQVVVFDDFPAEKVMEILAFASKGTPLIQNSFGYAFPQSQPSFPHNATIFSSDSQKPVSPNVNIVPNICNTLVQGRPQSPSGPVVGDLPIARKASLHRFLEKRKGRIAARAPYQTSNPMVAPNKSTESVTWLELAAKPTNI 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1880 217 ProSiteProfiles Tify domain profile. 64 99 IPR010399 -
Acco11g1880 217 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 194 IPR040390 -
Acco11g1880 217 Pfam Jas motif 165 190 IPR018467 -
Acco11g1880 217 SMART tify_2 64 99 IPR010399 -
Acco11g1880 217 Pfam tify domain 66 98 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1880 Acco-ChrAcco11 33074247 33075636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1880 19 213 Tify Gene Family AT1G19180 37.321 8.50e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Acco11g1880 tify 5.3e-15 No_clan