Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1878 ATGGATGATATCCACACTGCAAACAACAGCAGCAGCATGAGAATCTTGTCAAGCTATTTCCATTCCCTCTCACAAACTCCTCACAGGCTCAGAAAAAGAATGCTTGCCACTTGGACTCCAGACCAAGAACTCAACCAAGTTAGGCTCAGGTCTGGTTCAGACATGAGAAGGAAGCTTAAGTGGTATGATCTTATAGCTCTTGGTGTAGGAGGCATGCTCGGTGTTGGAGTTTTTGTTACAACTGGTTCTGTGGCTCTTCATCACTCTGGTTCCTCTGTCTTCATATCATATATCGTAGCCGGAATATCAGCCCTTCTCTCCTCTTTTTGTTATACTGAGTTTTCTGTTCAAGTCCCAGTTGCAGGAGGAGCTTTCAGTTACTTAAGATTAACATTTGGAGAATTTGTGGGGTATTTTGCTGGGGCAAATATACTGATGGAGTATGTATTGTCCAACGCTGCAGTTGCCAGGAATTTTACAGAGTATTTGAGCTATGCATTTGGGAAAAATGATCCAAATGTGTGGAGAGTGGAACTTCAGGGATTGCCTAAGGCCTATAACATGCTGGATTTTCCAGCTGTGGCTATTGTTCTTCTTCTCACTCTATGCTTGTGTCATAGCACCAAAGAAAGCTCCATATTGAACCTCATTATGACAGTCTTCCATGTGATTTTCTTTGGATTCATCATAGTCTCTGGTTTCTACAATGGAAGTGCAAAGAACTTGGTAAGTCCAAAAGGACTTGCTCCTTTTGGTGTTCGAGGTGTTCTTGATGGAGCAGCCATAGTCTACTTCAGCTACATAGGCTATGACTCAGCCTCCACCATGGCTGAAGAGATCAAAAATCCCTCAAAGAGCCTTCCAATTGGCATTATTGGCTCAGTTCTTATAACAACTGTGATTTATTGCCTAATGGCTTTATCACTATGTGTCATGGTTCCTTACAACCAGATTTCCGAGAAAGCATCATTTTCTGTAGCTTTTCTTAAGATTGGTTGGAAATGGGCAAGCAACATTGTAGGAGGAGGTGCTAGTTTGGGAATAGTGGCTTCTCTACTGGTAGCCATGTTAGGTCAAGCCAGGTACCTTTGCGTTCTTGGAAGGGCTAGGCTGGTCCCATCCTGGTTAGCTAAAGTACACCCTTCAACCGGCACTCCATTGAATGCCACACTCTTTCTGGGACTATGCACAGCATCTATAGCACTGTTCACGGAGCTGGACATAATAGTTGACATGGTGAGCATAGGAACACTGTTAGTGTTCTACTTGGTGGCCAATGCTCTTATATATCGCAGATATGTAATCACTAGCCATACCCCACCATTTACAACTCTCTTGTTCCTCTTCCTTCTCTCTGCAACTTCACTTGGCTTCTCCATTTCTTGGAAGTTCAAGCAACAATGGTGGGGTCTTCCTCTGTTTGGTGGCTTCATGATTACCATCACAGGCTTCTTCCAATACACAGTGCCTTATCTTCCCCAACCTGATTTATGGTCTGTTCCATTCATGCCTTGGCCTGCTGCTATATCCATCTTCCTCAACATTTTCCTCATGACAACTCTGAAACTCCTCTCTTTCCAAAGGTTTGCTATATGGTCTTGCCTCATTACAATCTTCTATGTGCTCTATGGGGTTCACTCTACATATCAAGCAGAAAAGACTGAGATGGGTGTTAATGAACCGGGCACAAACAGTTTACAATCAAAGGTAGAATTGCAAGTGCTTTAG 1728 0.4329 MDDIHTANNSSSMRILSSYFHSLSQTPHRLRKRMLATWTPDQELNQVRLRSGSDMRRKLKWYDLIALGVGGMLGVGVFVTTGSVALHHSGSSVFISYIVAGISALLSSFCYTEFSVQVPVAGGAFSYLRLTFGEFVGYFAGANILMEYVLSNAAVARNFTEYLSYAFGKNDPNVWRVELQGLPKAYNMLDFPAVAIVLLLTLCLCHSTKESSILNLIMTVFHVIFFGFIIVSGFYNGSAKNLVSPKGLAPFGVRGVLDGAAIVYFSYIGYDSASTMAEEIKNPSKSLPIGIIGSVLITTVIYCLMALSLCVMVPYNQISEKASFSVAFLKIGWKWASNIVGGGASLGIVASLLVAMLGQARYLCVLGRARLVPSWLAKVHPSTGTPLNATLFLGLCTASIALFTELDIIVDMVSIGTLLVFYLVANALIYRRYVITSHTPPFTTLLFLFLLSATSLGFSISWKFKQQWWGLPLFGGFMITITGFFQYTVPYLPQPDLWSVPFMPWPAAISIFLNIFLMTTLKLLSFQRFAIWSCLITIFYVLYGVHSTYQAEKTEMGVNEPGTNSLQSKVELQVL 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1878 575 PIRSF AA_transporter 40 496 - -
Acco11g1878 575 PIRSF AA_transporter 489 569 - -
Acco11g1878 575 Gene3D Amino acid/polyamine transporter I 54 494 - -
Acco11g1878 575 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 38 548 - -
Acco11g1878 575 Pfam C-terminus of AA_permease 498 547 IPR029485 -
Acco11g1878 575 Pfam Amino acid permease 59 460 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1878 Acco-ChrAcco11 33054688 33057357 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1878 146 560 Organic Solute Cotransporters AT5G04770 52.459 9.87e-143 418