Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1865 ATGTTGCTCTTACCCACACTATGTACCTCCCAAGACTTTACATCCTCCCGAGCTACCAATTATGTGTCACCGGCGTGTCTGGGCTCTGGAAGGGCGGATCTGGCTGCGGTACTTCGTGCTTGCTATCAAGTGAGGTGTAAGAACTCACAAGTATGCCATGAATATGGGACATCCGTGGTGGTGACGGACTACGGTGAAGGAGACAGGACAGACTTTGTGATGAGTCAACGTGCGTACGCGAGAATGGGAAAGAATCCAGACGCATCAGAGGAGCTGTTCAAATACGGCGTCGTAGAGGTGGAATACAGGAGGATTCCCTGCAGGTATAGGCTATCCAACGTAGCGTTCAAAGTAAAGGAGCAAAGCTCATACCCTAACTACATCGCCATTGTGGTGCTGTACGTGGCGGGCCAAAACGACATCACAGCCGTTGAGGTGTTTGAGGAGGATCGCAAGCAGTGGAGGCCGTTGAGGAGGGCGTACGGAGGGGTGTTTGATGCCGCGAACCCGCCACGTGGCAACCTGATGTTGAGGTTCCAGGTGAGTGGGTGTGGGGGTGTCACGTATTGGGTTCAGGCCAAGAATGCTATTCCCGGTGACTGGAAGGCCGGTCAAGCTTATGACTCTCAAGTTCAGCTAGAGTAG 645 0.5318 MLLLPTLCTSQDFTSSRATNYVSPACLGSGRADLAAVLRACYQVRCKNSQVCHEYGTSVVVTDYGEGDRTDFVMSQRAYARMGKNPDASEELFKYGVVEVEYRRIPCRYRLSNVAFKVKEQSSYPNYIAIVVLYVAGQNDITAVEVFEEDRKQWRPLRRAYGGVFDAANPPRGNLMLRFQVSGCGGVTYWVQAKNAIPGDWKAGQAYDSQVQLE 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1865 214 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 126 209 IPR007117 -
Acco11g1865 214 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 40 112 IPR007112 -
Acco11g1865 214 PRINTS Expansin/Lol pI family signature 154 168 IPR007118 GO:0005576
Acco11g1865 214 PRINTS Expansin/Lol pI family signature 195 209 IPR007118 GO:0005576
Acco11g1865 214 PRINTS Expansin/Lol pI family signature 28 46 IPR007118 GO:0005576
Acco11g1865 214 PRINTS Expansin/Lol pI family signature 95 111 IPR007118 GO:0005576
Acco11g1865 214 PANTHER EXPANSIN-B3 40 212 - -
Acco11g1865 214 Gene3D - 110 213 IPR036749 -
Acco11g1865 214 Gene3D - 7 108 IPR036908 -
Acco11g1865 214 SUPERFAMILY PHL pollen allergen 113 209 IPR036749 -
Acco11g1865 214 SUPERFAMILY Barwin-like endoglucanases 4 110 IPR036908 -
Acco11g1865 214 Pfam Expansin C-terminal domain 114 198 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1865 Acco-ChrAcco11 32954099 32955217 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1865 1 213 Expansin Gene Family AT4G17030 48.523 3.22e-73 220