Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1856 ATGGGGGTTATGGAGAATATGCCACATTCGAAGTCATTAGCCAGGGTTACTTCCACCAATAACGGCAATAACGATGAAAGATCTGGGAAACCATCGATGGAAAATGGGCATTGCACTGTTACTAACAAGGTCGTTTTTAAGCGCAGAAAAGTGTCTGCCGTTCGCGATTATCCTGAAGGTTGTGGACGGCATGCGCCCAGAATTGATTTAACACCAAATGTAAATATTGCTAACTCTGGTATTGATGAAGGTACACTAATCGAGGGTAAGAATGGTGAAGATCTAGTGGATGAATTTGTTAGAACTTCCAAGCTTGATGATGAGTCCCAACATACTGTGTTTCCTACTCAAACTCTTGGACAATCCGATGACTATAGTCTGAAGGAGGAAACACCTAGAACTGTGGATGAGCCTCCTTTGACAAATGATGAAACTTTACAAATGGGGTCTGTTGGCTTGGAAGATTTGGAATCCAGAAGAACTGCTGAAGCATTAATATGTGATTCTTCTAACATAACAAAAGACTTGCATAAAAATGGCCCTTCTTCTCCAGTAGGTGAGGTGGTTTTGTCAGGTAGTCAATTCTTATCACCAAATGCAAGTACGGCTGATGTCAAGACTGTAATGAGAAGGAATTTTCCCAAACGACGAGTTTCGGCCGTCAGAAACTTTCCTCCTTTTTGTGGAAGAAATGCTCCGCGCCTTGATAAGGATAAGTGCTTAGAGATCTCTTCTCGGGATAACAAAATCATGGGTCAACAGGACTTGGCTGTGGATGACAAGGAATTGAGCAAGGTCACGACCTCTGATGTGAAAGAAGTGGAAAAGAATGTTGAATGTGGAGATACTTGCAATCCAGTGAATATAGTTCAAGGTGATTTTGAAGGGAATGTTATGCAGGAAGTGAATAAGTTGGATGGAATTGGATCATCTTCTGGGATGAAATTGCCACCAAAAAATCCAGGAGATAAGGACATGGCACTGCCTGATGGAAGCACTCACAATCAGGTATTAACAAGTTCCCCAACCGAAGTTGAAGAGGAAAGCAGATACGCTATACAGGTTGAGGGAACACTAGGAAAAGAGATAGTTGTTCATTCAGGAGCTCAAAGCCTGGTGACAGAGCCCCTGGGTACATCTGCTCGCCGTCATAAGTCAATAGGAGATGTCAATGAATTGCAGGCTCCATCTAGCAGGGTAGTTGTGCTAGCTCTGATGGCTAATTCGGCACTTCCTTGGAGGAACAGTATAGGCAGTCCCAAATCTAGCATGGTTGGTGGTAAAAATAAAAGTAAGGTAAAGAAAATTGATTATTCTGCACAGTTTGACCGGTCTAAAGCTGCTACCAAGTCTAAAGACTCAACAAATTGTTCTGGGAAGAAGCCTGTAATAAAAAAAAAAGGAAGCTGCGCTGCAGAAGGTTTGGGTCAACTAGTGGTTTGGGAGAATAAAGATACGCTTGACTCTGATAAAAATATGGAAGAGAGAAGTGTTGTCCCAAAATCCCAAAGTTTTGAAGTTCAAGTTCCTCCTTTTGGTTATGGAAATCTAAATGGAAATGACAAGGGCTCAAATGTGACACGAAATAAAGTGAGGGAGACATTGCGCCTTTTTCAAGCTGTTACTAGAAAGCTATTGCGGGAGGAAGAAGCAAAGCCCAAAGACAAAGCAAACACTAATAGAAAGAGGATTGATACAACAGCAGCTAAGATCCTTAGGGAGAAAGGGAAATATGTTAACACAGGGAAGCCGATCTTGGGACTTGTCCCTGGGGTTGAAGTTGGTGATGAATTTCAGTACTGGGTGGAACTTAATGTGATTGGCCTTCATCGCCCGCCTCAGTCAGGCATAGATTATGTAAAGCATGACGATAAAATCCTTGCAACTAGTGTGGTTTCATCTAAGGGTTATGCTGATGAGTTAGGCAGTTCAGATGTCTTGACTTATACAGGGCAGGGAGGAGGTATGTTAAACAATGGTAAAGAACCAGAAGATCAGAAGCTTGAGAGGGGCAATCTTGCATTGAAGAATAGTGTTGCAGAAAAGAATCCTGTCAGGGTAATACGTGGCTGTGAATCAAGAGATGGAAAAAGGAGATATGTTTATGATGGGCTATATGAAGTTGAGGCATATTGGCAGGAAATGGGTCCACATGGTAAGTTGGTTTTTAGGTTTAGGATGCGTAGAATCCCAGGCCAACCAGAACTTGCTTGGAAAGAGGTGAAGGAATGCAAAAAATTCAAGAAAAGAGTGGGTGTATGTGTTAATGACATTTCTAATGGGAAAGAGCAAATTCCAATATGTGCTGTGAACACCATAGATGATGAAAAACCTCCACCGTTTGAATACACAACCAGAATGATATATCCTAATTGGTGCAATCCCATTCCTCTAGAGGGATGTAGTTGTACAAATGGATGCTCTGACTCTGAAAAATGTTCTTGTGCGGTCAAAAATGGGGGAGAGATCCCATACAACCACGATGGGGCCATTGTAGAAGCAAAGTCTCTTGTGTATGAGTGTGGCGCTTCTTGCAAGTGTCCTCCAGCATGTCATAACAGAGTCAGCCAACATGGCATAACATTTCAACTTGAAATTTTTAAAACCAAAACAAGAGGATGGGGTGTGAGATCCCTAAATTCCATCTCTTCAGGAAGTTTTATCTGTGAATATATAGGAGAGCTTCTTGAAGAGAAGGAAGCAGAACAAAGAACTGGCAATGATGAGTATCTGTTTGATATCGGAAATACCACCAATAATACTCTTTGGGATGGACTTTCTAGCCTACTGCCTGAGGCACAGTCAAGTTCTTGTGAAATTGTGGAAAATAGTGGCTTCACCATTGATGCTCTCCAGTATGGCAATGTTGGGAGATTTATCAACCATAGTTGCTCTCCTAATCTTTATGCTCAAAATGTACTTTATGATCATGATGACAGGAGAATACCTCACATAATGTTTTTTGCTGCTGAAAATATCCCTCCTCTGCAAGAGCTGTGTTATGATTACAATTATAAGATAGATCAAGTTCGTGATTCTGATGGAAATATAAAGAGGAAGGATTGTTTTTGTGGTTCTGCAGAGTGTACTGGTAGGATGTATTGA 3105 0.4151 MGVMENMPHSKSLARVTSTNNGNNDERSGKPSMENGHCTVTNKVVFKRRKVSAVRDYPEGCGRHAPRIDLTPNVNIANSGIDEGTLIEGKNGEDLVDEFVRTSKLDDESQHTVFPTQTLGQSDDYSLKEETPRTVDEPPLTNDETLQMGSVGLEDLESRRTAEALICDSSNITKDLHKNGPSSPVGEVVLSGSQFLSPNASTADVKTVMRRNFPKRRVSAVRNFPPFCGRNAPRLDKDKCLEISSRDNKIMGQQDLAVDDKELSKVTTSDVKEVEKNVECGDTCNPVNIVQGDFEGNVMQEVNKLDGIGSSSGMKLPPKNPGDKDMALPDGSTHNQVLTSSPTEVEEESRYAIQVEGTLGKEIVVHSGAQSLVTEPLGTSARRHKSIGDVNELQAPSSRVVVLALMANSALPWRNSIGSPKSSMVGGKNKSKVKKIDYSAQFDRSKAATKSKDSTNCSGKKPVIKKKGSCAAEGLGQLVVWENKDTLDSDKNMEERSVVPKSQSFEVQVPPFGYGNLNGNDKGSNVTRNKVRETLRLFQAVTRKLLREEEAKPKDKANTNRKRIDTTAAKILREKGKYVNTGKPILGLVPGVEVGDEFQYWVELNVIGLHRPPQSGIDYVKHDDKILATSVVSSKGYADELGSSDVLTYTGQGGGMLNNGKEPEDQKLERGNLALKNSVAEKNPVRVIRGCESRDGKRRYVYDGLYEVEAYWQEMGPHGKLVFRFRMRRIPGQPELAWKEVKECKKFKKRVGVCVNDISNGKEQIPICAVNTIDDEKPPPFEYTTRMIYPNWCNPIPLEGCSCTNGCSDSEKCSCAVKNGGEIPYNHDGAIVEAKSLVYECGASCKCPPACHNRVSQHGITFQLEIFKTKTRGWGVRSLNSISSGSFICEYIGELLEEKEAEQRTGNDEYLFDIGNTTNNTLWDGLSSLLPEAQSSSCEIVENSGFTIDALQYGNVGRFINHSCSPNLYAQNVLYDHDDRRIPHIMFFAAENIPPLQELCYDYNYKIDQVRDSDGNIKRKDCFCGSAECTGRMY 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1856 1034 MobiDBLite consensus disorder prediction 126 145 - -
Acco11g1856 1034 Pfam SET domain 873 1004 IPR001214 GO:0005515
Acco11g1856 1034 Pfam SAD/SRA domain 586 733 IPR003105 -
Acco11g1856 1034 Gene3D SET domain 750 1034 IPR046341 -
Acco11g1856 1034 SUPERFAMILY PUA domain-like 568 742 IPR015947 -
Acco11g1856 1034 ProSiteProfiles Post-SET domain profile. 1018 1034 IPR003616 -
Acco11g1856 1034 CDD SET_AtSUVH-like 779 1005 - -
Acco11g1856 1034 Pfam Pre-SET motif 758 854 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Acco11g1856 1034 MobiDBLite consensus disorder prediction 329 348 - -
Acco11g1856 1034 SMART set_7 862 1010 IPR001214 GO:0005515
Acco11g1856 1034 SMART PostSET_3 1018 1034 IPR003616 -
Acco11g1856 1034 Gene3D - 568 749 IPR036987 -
Acco11g1856 1034 MobiDBLite consensus disorder prediction 1 37 - -
Acco11g1856 1034 SMART preset_2 755 846 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Acco11g1856 1034 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 448 1028 - -
Acco11g1856 1034 SUPERFAMILY SET domain 745 1010 IPR046341 -
Acco11g1856 1034 ProSiteProfiles YDG domain profile. 587 729 IPR003105 -
Acco11g1856 1034 SMART G9a_1 582 733 IPR003105 -
Acco11g1856 1034 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 401 1034 IPR025794 GO:0016571
Acco11g1856 1034 MobiDBLite consensus disorder prediction 11 37 - -
Acco11g1856 1034 ProSiteProfiles Pre-SET domain profile. 799 859 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Acco11g1856 1034 ProSiteProfiles SET domain profile. 862 1004 IPR001214 GO:0005515
Acco11g1856 1034 MobiDBLite consensus disorder prediction 332 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1856 Acco-ChrAcco11 32895068 32898172 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1856 525 1031 Su(var)3-9 homologs AT5G04940 39.122 1.40e-111 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Acco11g1856 SAD_SRA 1.1e-46 CL0178