Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco11g1840 | ATGGCTACAACGGACGAAAGCGCCTCTACTAAAAGATGGCTTCCTCTCGAAGCTAACCCTGATGTGATGAATCAGTTCCTCCGGGGACTGGGCCTTCCAGAAAATGAGGCAGTGTGCTATGATGTGTATGGTCTGGATGAAGAACTGCTGGAAATGGTTCCCAAGCCTGTACTAGCTGTGCTTTTTCTTTATCCCTTAACTTCAAAGACTGAGGAAGAGAGGTTGCAACAGGAAAATGAAAAAAAGGAACACAGCACTAGAGTATATTTTATGAAGCAAACTGTGGGAAATGCTTGTGGTACTATAGGACTTCTTCATGCTCTTGGAAACATAACATCTGAGATCAAACTTACTGAGGGATCATTCTTTGATAGGTTCTTTAAAGCTACCACAAACATGGACCCATTACAGCGTGCAGCATTTCTTGAGAATGACAGAGAAATGGAAGTTGCTCATTCAATAGCTGCCACTGCTGGTGATACAGAGGCATCAGTTAATGTGGACACTCATTTCATCTGCTTTGCTTGTGTTGATGGTGAACTTTATGAGCTTGATGGAAGAAAGTCAGGACCTATATCCCATGGTCAATCCTCACCAAATACTCTTTTGAGGGATGCAGCTAAGGTCATACAGGGCATGATCCAGAAAAATCCTGGCTCTCTTAACTTCAATGTCATGGCCATTTCAAAGAAATCAGGAGATGGAAATTAA | 711 | 0.4248 | MATTDESASTKRWLPLEANPDVMNQFLRGLGLPENEAVCYDVYGLDEELLEMVPKPVLAVLFLYPLTSKTEEERLQQENEKKEHSTRVYFMKQTVGNACGTIGLLHALGNITSEIKLTEGSFFDRFFKATTNMDPLQRAAFLENDREMEVAHSIAATAGDTEASVNVDTHFICFACVDGELYELDGRKSGPISHGQSSPNTLLRDAAKVIQGMIQKNPGSLNFNVMAISKKSGDGN | 236 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco11g1840 | 236 | PRINTS | Ubiquitin C-terminal hydrolase (C12) family signature | 165 | 176 | IPR001578 | GO:0004843|GO:0006511 | |
| Acco11g1840 | 236 | PRINTS | Ubiquitin C-terminal hydrolase (C12) family signature | 53 | 65 | IPR001578 | GO:0004843|GO:0006511 | |
| Acco11g1840 | 236 | PRINTS | Ubiquitin C-terminal hydrolase (C12) family signature | 93 | 110 | IPR001578 | GO:0004843|GO:0006511 | |
| Acco11g1840 | 236 | PRINTS | Ubiquitin C-terminal hydrolase (C12) family signature | 181 | 191 | IPR001578 | GO:0004843|GO:0006511 | |
| Acco11g1840 | 236 | PRINTS | Ubiquitin C-terminal hydrolase (C12) family signature | 15 | 32 | IPR001578 | GO:0004843|GO:0006511 | |
| Acco11g1840 | 236 | PANTHER | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE | 11 | 231 | IPR001578 | GO:0004843|GO:0006511 | |
| Acco11g1840 | 236 | Gene3D | - | 7 | 231 | IPR036959 | GO:0004843|GO:0006511 | |
| Acco11g1840 | 236 | CDD | Peptidase_C12_UCH_L1_L3 | 13 | 228 | - | - | |
| Acco11g1840 | 236 | FunFam | Ubiquitin carboxyl-terminal hydrolase | 7 | 231 | - | - | |
| Acco11g1840 | 236 | SUPERFAMILY | Cysteine proteinases | 11 | 230 | IPR038765 | - | |
| Acco11g1840 | 236 | Pfam | Ubiquitin carboxyl-terminal hydrolase, family 1 | 13 | 214 | IPR001578 | GO:0004843|GO:0006511 |