Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1836 ATGCATTCTTTCTCATACGAAGCGCTGAAAGAGGCAACAAATGAGTTTAATGAAGAAGTAGGAAGGGGTTCGTTTGGCATTGTGTACAAAGGCACCCTCAATTCAATGACCAATACTGTTATTGCAGTAAAACGATTGGATAGGTTGGCTCAAGAACGAGAGGAGGAGTTTAGGACTGAATTGAGAGCTATTGGGAACACATGCCACAAAAATCTGGTCCGATTGATTGGGTTCTGTGACGAGGGAGTTCATAGACTTTTGGTGTACGAGTTCATGAGCAATGAGATAATTAGTTGCAGAAGAAGTGTGGAAAAGGATATCGGTGAAGTGGGTGAAGAAGTGGCTATACTAACAGATTGGGCTTCTGATTGCTATATGGAGGGAAGAATAGACATTCTAGTAGAGAATGATGTGGAGGCCTTGGTTGACATGGGGAGGGTGAAGAAATGGGTGATGATAGCAATATGTTATCCTTTTCGTCTATTCGATGTTCGGGAATGTCTGCTAGAAAATAAAGGACTATAA 525 0.4171 MHSFSYEALKEATNEFNEEVGRGSFGIVYKGTLNSMTNTVIAVKRLDRLAQEREEEFRTELRAIGNTCHKNLVRLIGFCDEGVHRLLVYEFMSNEIISCRRSVEKDIGEVGEEVAILTDWASDCYMEGRIDILVENDVEALVDMGRVKKWVMIAICYPFRLFDVRECLLENKGL 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1836 174 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 95 156 - -
Acco11g1836 174 SUPERFAMILY Protein kinase-like (PK-like) 3 95 IPR011009 -
Acco11g1836 174 ProSitePatterns Protein kinases ATP-binding region signature. 20 44 IPR017441 GO:0005524
Acco11g1836 174 FunFam S-receptor-like serine/threonine-protein kinase 1 91 - -
Acco11g1836 174 ProSiteProfiles Protein kinase domain profile. 14 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1836 174 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
Acco11g1836 174 Pfam Protein tyrosine and serine/threonine kinase 15 94 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1836 Acco-ChrAcco11 32682870 32684161 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1836 1 94 Receptor kinase-like Gene Family AT5G01950 46.875 4.77e-22 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco11g1836 PK_Tyr_Ser-Thr 1.8e-13 CL0016