Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1833 ATGATAGGATGGCCAACTGAATCTCGTTACACTAATTACTTTAGTGTCAATGTCAACAAGAGTTCATCAGCAACCAATGATAATGACTCTGCTTTACAGCTAGTCTTTGGTCCCTCAAATCTTTCTGTAGAGACAAGAGGATGCCAACCTGAGGCCTCACTTGGTTGTGGGGCTGATGATGTAGAATCAAAAACCAATCCGAAAGAGGTATACGACTTTAAGATTATGTATAATGTAGACTGGCCATTAGGAGATTATGAAAGATTGAACGATTATACCCGAGATGATTGCAAAACATCTTGCTGGCCAAAAAGGACTGTCCAAGTTTCAAGTGCTCTGGATGTAAATTTACACTCTTTCACTTATGAAGCATTGAAAGAGGCAACACTTGGATTCAGTGAAGTGTTAGGAAGGGGTTCATTTGGTACTGTGTACAAAGGCAACCTTAAATCAGGAGCTAGTAATGATAATGTTGTCGCAGTGAAGAGGTTGGATAGACTGGCTCAAGAGCGAGAGAAGGAGTTTAGGACAGAGTTGAGTGCCATTGGAAAAACATGCCACAAAAATTTGATAATTTGCTGTAGAAGAAATATGATGGTGGGTATGGAAGAAGGAGAGGAAGAAAAGGCAGTGCTGGTAGATTGGGCCTATGATTGTTATGCAGAAAGAAGAATAGATATTTTGGTAGAGAAAGATAAGGAAGCCATGGCTGATATAGGGAGGTTGAGGAAGTGGGTGATGATAGCGATTTGGTGTATTCAGGAGAAGCAAGAAGCAAGGCCAAGCATGAAGGTTGTGATGCAAATGTTGGAAGGACTTGTTGAAGTGCCAAATCCACCATTGCCTTCTTCCTTCACCTCAACTATGATTTGA 873 0.4101 MIGWPTESRYTNYFSVNVNKSSSATNDNDSALQLVFGPSNLSVETRGCQPEASLGCGADDVESKTNPKEVYDFKIMYNVDWPLGDYERLNDYTRDDCKTSCWPKRTVQVSSALDVNLHSFTYEALKEATLGFSEVLGRGSFGTVYKGNLKSGASNDNVVAVKRLDRLAQEREKEFRTELSAIGKTCHKNLIICCRRNMMVGMEEGEEEKAVLVDWAYDCYAERRIDILVEKDKEAMADIGRLRKWVMIAIWCIQEKQEARPSMKVVMQMLEGLVEVPNPPLPSSFTSTMI 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1833 290 Pfam Protein tyrosine and serine/threonine kinase 132 192 IPR001245 GO:0004672|GO:0006468
Acco11g1833 290 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 113 191 - -
Acco11g1833 290 ProSitePatterns Protein kinases ATP-binding region signature. 136 162 IPR017441 GO:0005524
Acco11g1833 290 SUPERFAMILY Protein kinase-like (PK-like) 111 191 IPR011009 -
Acco11g1833 290 ProSiteProfiles Protein kinase domain profile. 130 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1833 290 Gene3D Transferase(Phosphotransferase) domain 1 195 276 - -
Acco11g1833 290 Gene3D Phosphorylase Kinase; domain 1 86 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1833 Acco-ChrAcco11 32652609 32655299 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1833 113 196 Receptor kinase-like Gene Family AT3G55550 44.944 2.55e-14 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco11g1833 PK_Tyr_Ser-Thr 1.2e-08 CL0016