Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1831 ATGCATTCTTTCTCATACGAAAAACTGAAGGAGGCAACAAATGAGTTTAATGAAGAAGTAGGAAGGGGTTCGTTTGGCATTGTGTACAAGGGCACCCTCAATTCAATGACCAATACTGTTATTGCAGTAAAAAAATTGGATAGGTTGGCTCAAGAACGAGAGGAGGAGTTTAGGACTGAATTGAGAGCTATTGGGAACACATGCCACAAAAATCTGGTCCGATTGATTGGCTATGGCGTGATGCTGTTAGAGATGATTAGTTGCAGAAGAAGTGTGGAAAAGGATATGGGTGAAGTGGGTGAAGAAGTGGCTATACTGACAGATTGGGCTTCTGATTGCTATATGGAGGGAAGAATAGACATTCTAGTAGAGAACGATGTGGAGGCCTTGGTTGACATGGGGAGGGTGAAGAAATGGGTGATGATAGCAATATGTTATCGTTTTCGTCTATTTGATGTTCGGCAAAGTCTGCTTGAAAATAAATGA 486 0.4156 MHSFSYEKLKEATNEFNEEVGRGSFGIVYKGTLNSMTNTVIAVKKLDRLAQEREEEFRTELRAIGNTCHKNLVRLIGYGVMLLEMISCRRSVEKDMGEVGEEVAILTDWASDCYMEGRIDILVENDVEALVDMGRVKKWVMIAICYRFRLFDVRQSLLENK 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1831 161 ProSiteProfiles Protein kinase domain profile. 14 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1831 161 Pfam Protein tyrosine and serine/threonine kinase 15 78 IPR001245 GO:0004672|GO:0006468
Acco11g1831 161 Gene3D Phosphorylase Kinase; domain 1 1 86 - -
Acco11g1831 161 ProSitePatterns Protein kinases ATP-binding region signature. 20 45 IPR017441 GO:0005524
Acco11g1831 161 SUPERFAMILY Protein kinase-like (PK-like) 3 80 IPR011009 -
Acco11g1831 161 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 78 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1831 Acco-ChrAcco11 32638566 32639848 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1831 4 78 Receptor kinase-like Gene Family AT3G53380 45.455 1.10e-15 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco11g1831 PK_Tyr_Ser-Thr 1e-09 CL0016