Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1829 ATGTCCGGGCCCACCAGCTACGACTCCAACTTAGCCTTTTTGGAATCCATTAGCCATCACTTGCTCGGTGAATCCGGTGATGCTCCGGCTGATGCATCCAGTAAAAACCCTCTTTACTCTCGGAGCTCCGGTTTCAACAGATTGGATCATTGGGGAGAATTGCCTCTCACACAGCATGACCGCCAAGACATGCTGCTCTACGGTGTGTCACGGGATACACTCCAAGTCGGATGGACCCCAACCGTGAACTTCACGTCGCCGGAGATGGTCTGCTCGGCTTTGCCGTCCACCATTACGGTGAAACCGGAGCCAGATGTTGTAGTACAGGCGGCGGCTGCACCACAGCAGAAGGCGAAGCATTACCGAGGAGTGCGCCGACGGCCGTGGGGGAAATTCGCGGCGGAGATCCGGGACCCGTCTAAGAATGGGGCTCGGGCATGGCTGGGGACATTTGAGACGGCGGAGGACGCGGCTCTGGCGTACGACCGAGCCGCCTACAGGATGCGGGGCTCGCGGGCTCTTGTTAATTTTCCGCTGAGGGTGAACTCGGGTGAACCTGATCCAGTGAGGGTGAGGGCGAAGCGGTCTTCGTCGGAGGCAAGGTCGTCGAATTCAGAGATTGGGAAGCGAAAGGCGAAGGAGGCGAGAAGGGAAGTGGCGTCTTGTACAAATGGACGGCACCTATTGGTCTTGCCACTGAACTCATGGGCTCAACTATCTGGGCCCAGAAGTATTTCCAAGAGCATTGAGGCCCAACAATCTGATCAGTCCTTAGATATAGGATGGCCAACTGAATCTCGTTACACTAATTACTTTAGTGTCAACAAGAGTTCATCAGCAACCAATGATAATGACTCTGCTTTACAGCTAGTCTTTGATCCCTCAAATCTTTATGTAGAGACAAGAGGTGGAGATCATAAACCCCTTGGACCTGGATGCAACTTGTTTGGAGGATGCCAACCTGAGGCCTCACTTGGTTGTGGGGCTGATGATGTAGAATCAAAAACCAATCCGAAAGACGTGTATGAGTTTAAGATTATGCAAAATGTAGACTGGCCTTTAGGAGATTATGAAAGATTGTACAATTATACCCAAGATGAATGCCAGACATCTTGCTGGCCAAAAAGGACTGTCCAAGTTTCAAGTGCTCTGGATGTAAATTTGCACTCTTTCACTTATGAAGCATTGAAAGAGGCAACACTTGGATTCAGTGAAGTGTTAGGAAGGGGTTCATTTGGTACTGTGTACAAAGGCAACCTTAAATCAGGAGCTACTAATGATCATGTTGTTGCAGTGAAGAGGTTGGACAGATTGGCTCAAGAACGAGAGAAGGAGTTTAGGACAGAGTTGAGTGCCATTGGAAAGACCTACCACAAAAATTTGGTGAGATTAATTGGTTTTTGTGATGAGGAAGTTCATAGACTCCTAGTGTACGAGTTCATGAGCAATGGAACTCTTGCTGACATCCTCTTTGGAGAACTCAAACCCATTTGGAATTTAAGGGTTAACTTTGCTCTAGGAATTGCAAGAGGATTGCTTTATTTACATGAAGAGTGTGACGCTCCCATCATTCATTGTGATATAAAGCCTCAGAATATACTGATAGATGGACATTTCATACCAAAAATCTCAGACTTTGGGTTGGCCAAGTTGCTATATTTCAATCAAAGCCGAACTAATACGGTGATAAGAGGAACAAGAGGATATGTTGCACCAGAATGGTTCAAAACAGTTCCGGTGACTACTAAAGTGGATGTTTATAGCTACGGGGTGATGCTATTAGAGATAATTTGCTGTAGAAGAAATGTGATGGTGGATATGGAAGGAGAGGAAGAAAAGGCAGTGCTGGTAGATTGGGCCTATGATTGTTATGCAGAAAGAAGAATAGATATTTTGGTAGAGAAAGATAAGGAAGCCATGGCTGATATAGGGAGGTTGAGGAAGTGGGTGATGATAGCGATTTGGTGTATTCAGGAGAAGCAAGAAGCAAGGCCAAGCATGAAGGTTGTGATGCAAATGTTGGAAGGACTTGTTGAAGTGCCAAATCCACCATTGCCTTCTTCCTTCACCTCAACTATGATTTGA 2085 0.4686 MSGPTSYDSNLAFLESISHHLLGESGDAPADASSKNPLYSRSSGFNRLDHWGELPLTQHDRQDMLLYGVSRDTLQVGWTPTVNFTSPEMVCSALPSTITVKPEPDVVVQAAAAPQQKAKHYRGVRRRPWGKFAAEIRDPSKNGARAWLGTFETAEDAALAYDRAAYRMRGSRALVNFPLRVNSGEPDPVRVRAKRSSSEARSSNSEIGKRKAKEARREVASCTNGRHLLVLPLNSWAQLSGPRSISKSIEAQQSDQSLDIGWPTESRYTNYFSVNKSSSATNDNDSALQLVFDPSNLYVETRGGDHKPLGPGCNLFGGCQPEASLGCGADDVESKTNPKDVYEFKIMQNVDWPLGDYERLYNYTQDECQTSCWPKRTVQVSSALDVNLHSFTYEALKEATLGFSEVLGRGSFGTVYKGNLKSGATNDHVVAVKRLDRLAQEREKEFRTELSAIGKTYHKNLVRLIGFCDEEVHRLLVYEFMSNGTLADILFGELKPIWNLRVNFALGIARGLLYLHEECDAPIIHCDIKPQNILIDGHFIPKISDFGLAKLLYFNQSRTNTVIRGTRGYVAPEWFKTVPVTTKVDVYSYGVMLLEIICCRRNVMVDMEGEEEKAVLVDWAYDCYAERRIDILVEKDKEAMADIGRLRKWVMIAIWCIQEKQEARPSMKVVMQMLEGLVEVPNPPLPSSFTSTMI 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1829 694 MobiDBLite consensus disorder prediction 185 218 - -
Acco11g1829 694 SMART serkin_6 401 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1829 694 FunFam S-receptor-like serine/threonine-protein kinase 372 480 - -
Acco11g1829 694 FunFam Ethylene-responsive transcription factor 2 119 179 - -
Acco11g1829 694 CDD AP2 120 178 IPR001471 GO:0003700|GO:0006355
Acco11g1829 694 ProSiteProfiles Protein kinase domain profile. 401 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1829 694 Gene3D AP2/ERF domain 119 181 IPR036955 GO:0003700|GO:0006355
Acco11g1829 694 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 384 686 - -
Acco11g1829 694 Pfam Protein kinase domain 405 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1829 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 523 535 IPR008271 GO:0004672|GO:0006468
Acco11g1829 694 SUPERFAMILY Protein kinase-like (PK-like) 382 675 IPR011009 -
Acco11g1829 694 Gene3D Phosphorylase Kinase; domain 1 365 480 - -
Acco11g1829 694 ProSiteProfiles AP2/ERF domain profile. 120 178 IPR001471 GO:0003700|GO:0006355
Acco11g1829 694 ProSitePatterns Protein kinases ATP-binding region signature. 407 433 IPR017441 GO:0005524
Acco11g1829 694 PRINTS Ethylene responsive element binding protein signature 121 132 IPR001471 GO:0003700|GO:0006355
Acco11g1829 694 PRINTS Ethylene responsive element binding protein signature 144 160 IPR001471 GO:0003700|GO:0006355
Acco11g1829 694 Gene3D Transferase(Phosphotransferase) domain 1 481 682 - -
Acco11g1829 694 SMART rav1_2 120 184 IPR001471 GO:0003700|GO:0006355
Acco11g1829 694 SUPERFAMILY DNA-binding domain 120 180 IPR016177 GO:0003677
Acco11g1829 694 Pfam AP2 domain 120 170 IPR001471 GO:0003700|GO:0006355
Acco11g1829 694 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 481 682 - -
Acco11g1829 694 CDD STKc_IRAK 407 677 - -
Acco11g1829 694 MobiDBLite consensus disorder prediction 187 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1829 Acco-ChrAcco11 32628351 32633073 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1829 387 679 Receptor kinase-like Gene Family AT5G45780 42.333 5.67e-66 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco11g1829 Pkinase 4e-47 CL0016
TF AP2/ERF-ERF Acco11g1829 Pkinase 4e-47 CL0016