Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1828 ATGATGGCCAATCAAGTTGAGTTTTCAGCTCTCGAACGCATAAAATTACATCTTCTAGGTGAACTCTCTCCGGTGGTAACGTCCGCTTCTGACGCCCTTTGGTTTGAGGAAGTGAACTCATCTATTTCAAGTTCCCAATCTCTCTGTTCCCAATCTTCAATTTCTGATGCTAATTCCATCATATCTGATTGCTTTCCTGAGATCCTCGATTTCCCGGCCAATCCTGTACTTTCATCACAAGATCAAACAAATCCGTTTGAATTCGAGTCGAAACCCCAAATAATTGATCTCGAAACGCCAAATTCCCAAATCCAACCCTCGCAAATCGAAACTAGGTTTCCCAAACTCGAATCTAACACGCTGGAAAGCCCTCCGTCAAATAGTTGCGTGTTAGACTTCGATCCAAGACCTAATGAATCGCAGAAGAAATCTACGTCCATTAGGAAACCGTCGTTGCAAATCTCGCTTCCGAGGAAGACCGAATGGATCCAGTTTGGGAATCCGGAGCAGCAAGAGGAGGTGGCAGAGATGTCGGAGCAGAAAAACCCGAAGGAAATCGAGAAGAAGCACTACAGAGGAGTCCGACAGAGGCCATGGGGCAAGTATGCGGCGGAAATCCGAGATCCAAATAAGCGCGGATCCAGGGTGTGGTTGGGAACATTCGACACAGCTATCGAAGCCGCCAAAGCTTACGATCGAGCTGCCTTTAAGCTTCGCGGCTCCAAAGCCATCCTGAACTTCCCTTTGGAAATTGGAACATCGAGCTCGGTGGTTAGCTCCGGCGAGGGAAAACGCCGCCGTCAAGACGAAGAGGAGGTGGCGGAGGTGGAGGTAAAGCCGGTGGTGAAGAAGGCGAAAACGACGACGGAATCGGAATCTCAGCAGAACTATACAAAGGACACTCCGTTAACGCCGTCTAATTGGAAGGGGTTCTGGGACACCGATTCAAACGGGATTTTCAGTATCCCGCCGTTATCCCCTATCCCTCCCTTTGGTTGTCACCAGCTTATGGTTGTATGA 1020 0.4892 MMANQVEFSALERIKLHLLGELSPVVTSASDALWFEEVNSSISSSQSLCSQSSISDANSIISDCFPEILDFPANPVLSSQDQTNPFEFESKPQIIDLETPNSQIQPSQIETRFPKLESNTLESPPSNSCVLDFDPRPNESQKKSTSIRKPSLQISLPRKTEWIQFGNPEQQEEVAEMSEQKNPKEIEKKHYRGVRQRPWGKYAAEIRDPNKRGSRVWLGTFDTAIEAAKAYDRAAFKLRGSKAILNFPLEIGTSSSVVSSGEGKRRRQDEEEVAEVEVKPVVKKAKTTTESESQQNYTKDTPLTPSNWKGFWDTDSNGIFSIPPLSPIPPFGCHQLMVV 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1828 339 MobiDBLite consensus disorder prediction 117 150 - -
Acco11g1828 339 CDD AP2 189 248 IPR001471 GO:0003700|GO:0006355
Acco11g1828 339 MobiDBLite consensus disorder prediction 287 304 - -
Acco11g1828 339 SUPERFAMILY DNA-binding domain 190 250 IPR016177 GO:0003677
Acco11g1828 339 MobiDBLite consensus disorder prediction 262 286 - -
Acco11g1828 339 FunFam Ethylene-responsive transcription factor 2 189 250 - -
Acco11g1828 339 Gene3D AP2/ERF domain 189 250 IPR036955 GO:0003700|GO:0006355
Acco11g1828 339 ProSiteProfiles AP2/ERF domain profile. 190 248 IPR001471 GO:0003700|GO:0006355
Acco11g1828 339 MobiDBLite consensus disorder prediction 256 304 - -
Acco11g1828 339 Pfam AP2 domain 190 240 IPR001471 GO:0003700|GO:0006355
Acco11g1828 339 PANTHER DNA-BINDING DOMAIN 146 297 IPR044808 GO:0003700|GO:0009873
Acco11g1828 339 PRINTS Ethylene responsive element binding protein signature 191 202 IPR001471 GO:0003700|GO:0006355
Acco11g1828 339 PRINTS Ethylene responsive element binding protein signature 230 250 IPR001471 GO:0003700|GO:0006355
Acco11g1828 339 SMART rav1_2 190 254 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1828 Acco-ChrAcco11 32613554 32614573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1828 2 339 AP2-EREBP Transcription Factor Family AT5G47230 45.821 1.86e-68 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco11g1828 AP2 5.2e-16 CL0081