Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1821 ATGCATCTTGAAGAATTGAAGGGAGAAGACGTGGGAGGTGGAGAGGAAGGGAAAGTATATCTCGGAAATGGTGTTATTGGCGGGACAAGTTTTGTCATGTCAGATGCGAAAAGAACTCTGGTTGGAGCGGGGGCTCGTGCTCTCTTCTATCCCACTCTGCTTTATAATGTCGTTAGGAATAAGATGCAGGCCGAGTTCCGGTGGTGGGATAAGGTTGATGAGTCCATATTATTAGGTGCTGTTCCCTTCCCTATTGATGTTCCCCGCTTAAAGGAGCTGGGTGTTCGAGGAGTCATCACATTGAACGAGTCATATGAGACTTTGGTTCCTACATCACTTTATCACGCTCATGGAATTGACCATCTTGTGCTTCCTACTAGAGATTATTGTTTCGCACCTTCACTGAATGACATATGCTCTGCTGTAGACTTCATTCATGAAAATGCATTGGCTGGACGGGTTACATATGTCCATTGCAAAGCTGGGCGCGGTCGCAGCACAACTGTTGTTATCTGTTACCTGGTGCACCACAAGCTTATGACACCCAGTGCTGCATATGATTATGTAAAGTCAATTCGACCAAGGGTTCTTCTGGCTTCCTCTCAGTGGCAAGCTGTTCAGGAATACTACCACCTTAGGGTAAGGAATGCTATGGCCTTTGCTCCCTCGGCCAACCTGCTAATGGAGGCACCTGCAGCGGCAGCAACTTCACTAGACCTTGTAACATTTGACGATGGTTCAGTCGTCGTGGTAACAGAATCAGATCTGGAAGGTTATGACCCCACTTCAGGAAGGGAGATATGGGCAAATGTGAGTTTGGTCTACCAGGTGCGGGTTGTTGGACAGGCAGCATTGGCAAGAATATCTTGCCTTTGGCTGAGATATGGTAGCCACCCGGAGGTTTCCCAGGACAAACGTTTGGGAGGCATTAGTGTTGATATCCATGTCTACTGA 954 0.4759 MHLEELKGEDVGGGEEGKVYLGNGVIGGTSFVMSDAKRTLVGAGARALFYPTLLYNVVRNKMQAEFRWWDKVDESILLGAVPFPIDVPRLKELGVRGVITLNESYETLVPTSLYHAHGIDHLVLPTRDYCFAPSLNDICSAVDFIHENALAGRVTYVHCKAGRGRSTTVVICYLVHHKLMTPSAAYDYVKSIRPRVLLASSQWQAVQEYYHLRVRNAMAFAPSANLLMEAPAAAATSLDLVTFDDGSVVVVTESDLEGYDPTSGREIWANVSLVYQVRVVGQAALARISCLWLRYGSHPEVSQDKRLGGISVDIHVY 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1821 317 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 136 204 IPR000387 GO:0016311|GO:0016791
Acco11g1821 317 SMART dsp_5 71 212 IPR020422 GO:0006470|GO:0008138
Acco11g1821 317 CDD PTPMT1 68 210 IPR044596 GO:0004721
Acco11g1821 317 Gene3D Protein tyrosine phosphatase superfamily 68 216 IPR029021 -
Acco11g1821 317 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 59 212 IPR029021 -
Acco11g1821 317 ProSitePatterns Tyrosine specific protein phosphatases active site. 157 167 IPR016130 GO:0016311|GO:0016791
Acco11g1821 317 Pfam Dual specificity phosphatase, catalytic domain 90 210 IPR000340 GO:0008138|GO:0016311
Acco11g1821 317 ProSiteProfiles Dual specificity protein phosphatase domain profile. 68 215 IPR020422 GO:0006470|GO:0008138
Acco11g1821 317 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 28 293 - -
Acco11g1821 317 FunFam Dual specificity phosphatase domain protein 68 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1821 Acco-ChrAcco11 32573150 32575312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1821 1 317 Protein tyrosine phosphatase (PTP) family AT2G35680 58.284 4.66e-132 377