Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1801 ATGAACCTCGATGAAGTGGGATTGAAAATGGTGAAGATAGCATTTGGTAGCTTTCCTGATTCTTTTAGCGTTGATTCCATTAAGGCTTATGTAGCAGAGTTCTTTGCTACCCTTATCTTCGTCTTCGCCGGAGTTGGATCAGCCATCGCCTACGGTGAGCTTACAAAGGGTGCAGCTTTGGATGCGCCGGGACTGGTAGCGGTGGCGTTGGCCCATGGGCTTGCCTTGTTTGTCGGCGTGGCGGTGGCGGCCAACATCTCAGGCGGTCATTTGAACCCGGCGGTTACTTTTGGATTGGCAATTGGAGGCAACATTACCATCTTAACTGGTCTCTTGTACTGGGTTTTCCAATTGCTTGGCTCCATCGTTGCGTGCCTCCTCCTTAAATTTGTTACTGGTGGCAAGGCCATTCCAACACATGGACTCGCAGCAGGTGTGGGTGCAGGAGCAGGTATAGTGTTTGAGATTATTGTGACCTTTGGATTAGTTTACACTGTGTACGCGACGGCGGCTGATCCCAAGAAGGGTTCTCTGGCCACTATTGCACCTATTGCGATTGGGTTCATTGTGGGAGCCAACATCTTGGCTGCCGGTCCATTTAGTGGCGGTTCCATGAACCCGGCTCGTTCATTCGGCCCAGCCGTCGTCAGCGGCAACTTTACCGATAACTGGATTTACTGGGTTGGCCCATTGGTCGGTGGGGGCTTGGCTGGTCTCGTCTATGGTGATGTTTTCATTGGTTCCTACGCCCCAGTTCCTCCCGCTGAAGGCTACGCTTAA 780 0.5205 MNLDEVGLKMVKIAFGSFPDSFSVDSIKAYVAEFFATLIFVFAGVGSAIAYGELTKGAALDAPGLVAVALAHGLALFVGVAVAANISGGHLNPAVTFGLAIGGNITILTGLLYWVFQLLGSIVACLLLKFVTGGKAIPTHGLAAGVGAGAGIVFEIIVTFGLVYTVYATAADPKKGSLATIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGNFTDNWIYWVGPLVGGGLAGLVYGDVFIGSYAPVPPAEGYA 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1801 259 ProSitePatterns MIP family signature. 90 98 IPR022357 -
Acco11g1801 259 CDD MIP 28 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco11g1801 259 Gene3D Glycerol uptake facilitator protein. 11 249 IPR023271 -
Acco11g1801 259 PANTHER AQUAPORIN-8 13 247 IPR034294 -
Acco11g1801 259 SUPERFAMILY Aquaporin-like 22 247 IPR023271 -
Acco11g1801 259 NCBIfam MIP family channel protein 32 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco11g1801 259 FunFam Probable aquaporin TIP1-1 11 256 - -
Acco11g1801 259 PRINTS Major intrinsic protein family signature 154 172 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco11g1801 259 PRINTS Major intrinsic protein family signature 72 96 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco11g1801 259 PRINTS Major intrinsic protein family signature 109 128 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco11g1801 259 PRINTS Major intrinsic protein family signature 224 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco11g1801 259 PRINTS Major intrinsic protein family signature 28 47 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco11g1801 259 PRINTS Major intrinsic protein family signature 187 209 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco11g1801 259 Pfam Major intrinsic protein 23 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1801 Acco-ChrAcco11 32429051 32432084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1801 10 256 Major Intrinsic Protein MIP AT5G47450 76.113 1.11e-130 368