LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco11g1791	ATGCCTTCTTCTTTGTCCTTGTTGTCGTTGATTTTGGTTTCTGTTTTGTTATTGTTTCATGCAGAAACAGTGACATGTACACCCTCCGACGATAACACCCCAAGTTCACCACCACCAGTGTCTTCCACAAACTCCTCATCGAAGCACCGTCACCGTTGGGTGGGCCCTATCGGTTACCGTGTAATCACCGTGGACGTGAACGGCACAGGGCAATTCAGATCCGTGCAAGCCGCCGTGGATGCTGTCCCAGACAATAATCGAATGAACGTCGTCATTAATATTAGCGCTGGATGCTACGTAGAGAAGGTGGTGGTGCCGGCGACGAAACCCTATATAACGTTTCAGGGAGCGGGGAGGGACGTGACGGTGATAGAATGGCATGACAGAGCCAGCGACCCTGCTCCCAATGGACAACAGCTACGTACTTACAGAACTGCTTCCGTCACTGTCTTTGCCAACTATTTCTCTGCTAGGAATATCAGCTTTAAGAACACGGCGCCGGCGCCGATGCCGGGAATGGAGGGATGGCAAGCTGCGGCGTTTAGGATATCGGGGGACAAGGCATATTTCTCAGGATGCGGATTCTACGGTGCACAAGACACTCTTTGTGACGACGCTGGCCGCCATTATTTCAAGGACTGCTACATCGAGGGTTCCATTGATTTCATCTTCGGCAATGGTCGTTCCATGTATAAGGATTGTGTGATGCACTCGATAGCGACGAAATTCGGTTCGATAGCAGCTCACAAGAGAAAATACGTGGACGAGAAGACGGGCTTCGCATTCGTAGGGTGCCAGGTGACGGGTACGGGCCCACTCTATGTGGGCCGAGCATTGGGCCAATACTCCAGAATCGTCTACGCTTATACGTTTTTTGATGACATTGTTGCCCAACAAGGTTGGGACGACTGGAGCCATGCGGACAACAAAAACAAGACTGTGCTTTTCGGAGTGTATAAGTGCTGGGGTCCAGGAGCTGCGGCGGCGCGTGGGGTGTCCTTAGCCCGTGAGCTTGACTTTGAATCTGCCCATCCATTTCTCGTTAAGAGCTTCGTCAATGGCAGACACTGGATTGCACCTTCTGATGCTTAG	1092	0.5156	MPSSLSLLSLILVSVLLLFHAETVTCTPSDDNTPSSPPPVSSTNSSSKHRHRWVGPIGYRVITVDVNGTGQFRSVQAAVDAVPDNNRMNVVINISAGCYVEKVVVPATKPYITFQGAGRDVTVIEWHDRASDPAPNGQQLRTYRTASVTVFANYFSARNISFKNTAPAPMPGMEGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKDCYIEGSIDFIFGNGRSMYKDCVMHSIATKFGSIAAHKRKYVDEKTGFAFVGCQVTGTGPLYVGRALGQYSRIVYAYTFFDDIVAQQGWDDWSHADNKNKTVLFGVYKCWGPGAAAARGVSLARELDFESAHPFLVKSFVNGRHWIAPSDA	363

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco11g1791	363	Pfam	Pectinesterase	62	354	IPR000070	GO:0030599\|GO:0042545
	Acco11g1791	363	MobiDBLite	consensus disorder prediction	27	50	-	-
	Acco11g1791	363	SUPERFAMILY	Pectin lyase-like	60	360	IPR011050	-
	Acco11g1791	363	ProSitePatterns	Pectinesterase signature 2.	216	225	IPR033131	-
	Acco11g1791	363	Gene3D	-	59	362	IPR012334	-
	Acco11g1791	363	PANTHER	ACYL-COA THIOESTER HYDROLASE YBHC-RELATED	57	359	-	-
	Acco11g1791	363	FunFam	Pectinesterase	58	360	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco11g1791	Acco-ChrAcco11	32332013	32334060	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco11g1791	4	363	Carbohydrate Esterase	AT5G47500	70.556	0.0	533