Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1776 ATGTGTGCTCCTTTCTTATCACTTGAGATCTTTGATTCTGCAAAACTAGTTCATTTGCTGATTTCAAAGAGGTATGTATTGATTCGCTGCATAAGGTTTAAGATGGGGTGTGATTTTTCCAAGTTCCCAGCATGCTGCTCGGGTGCAGAGCAAAGTGGTCCAGTTCTTGAAGCAAATATTGATGAAAATGAAGAGAATAGTGAGGCCACTGATGTGCCACCATTTCAAGAATATACAATTGATCAGCTTAGGAAGGCTACTTCTGGATTTGCTGTCGAGAATATAGTTTCTGAGCATGGAGAAAAGGCACCAAATGTGGTTTATAAAGGGAAACTAGAAAATCAAACGCGAATTGCTGTCAAACGGTTCAATAGATCAGCCTGGCCTGATGCACGACAATTTTCAGAAGAAGCCAAGGCTGTTGGACATCTAAGGAACGAAAGATTGGCAAATTTACTTGGATGTTGCAGTGATGGTGATGAGAGGTTACTTGTTGCAGAATATATGCCTAATGATACTTTGGCAAAGCACTTGTTCCACTGGGAAACTCAGCCCATGAAATGGGCAATGCGACTAAGAGTTGCTTTATACCTTGCCCAAGCACTAGAATATTGTACTAGCAAAGGACGTGCACTATATCATGATCTAAATGCTTATAGAGTACTTTTTGATGATGAAGGAAATCCTAGACTCTCATGCTTTGGCTTGATGAAAAACAGTCGGGACGGTAAAAGTTATAGCACAAACCTGGCATTTACTCCGCCTGAGTATTTAAGGACAGGTAGAGTTACTCCTGAAAGTGTAACATATAGTTTTGGAACCCTTTTGCTTGACCTTCTCAGTGGAAAGCATATTCCTCCAAGCCATGCACTTGACCTGATTCGAGACAGGAACCTTCAGATGCTGACAGATTCTTGTCTAGAAGGACAATTTTCAAATGATGAGGGGACTGAATTAGTGCGCTTGGCCTCACGATGTTTACAATCAGAACCCCGGGAGCGTCCTTATCCGAAGTCATTGGTTTCTGCTTTAATAGATCTGCAGAAGGATTCTGAGGTTCCTTCTCATGTTTTGATGGGTATACCACATGACACAAATTCTTTACCACTTTCACCATTTGGTGAGGCATGTCTAAGAATGGATTTGACTGCCATCCATGAGGTCCTTGAAAAACTTGGGTATAAAGATGATGAGGGTGCTGCTACTGAGCTTTCATTCCAAATGTGGACCAACCAGATGCAAGAAACACTGAACTCAAAGAAGAAGGGTGATTCCGCTTTCCGTCATAAAGACTTCAAAGCTGCAATTGATAGCTATACTCAGTTCATTGATGTTGGAACTATGGTTTCTCCAACTGTTTATGCACGCCGCAGTCTGTCTTATCTCATGAACAACATGCCAGAAGAAGCACTGAAGGATGCATTGCAGGCCCAATTAGTTTCCCCTGTTTGGCATATTGCTTCCTACTTACAAGCTGTGGCACTTCTTGCATTGGGCAGGGAAAATGAGGCCCAGGGGGCACTTAAAGAGGCTTCTTCACTTGAAAGTAAAAAGAACACAAATTAA 1566 0.4202 MCAPFLSLEIFDSAKLVHLLISKRYVLIRCIRFKMGCDFSKFPACCSGAEQSGPVLEANIDENEENSEATDVPPFQEYTIDQLRKATSGFAVENIVSEHGEKAPNVVYKGKLENQTRIAVKRFNRSAWPDARQFSEEAKAVGHLRNERLANLLGCCSDGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALYLAQALEYCTSKGRALYHDLNAYRVLFDDEGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSNDEGTELVRLASRCLQSEPRERPYPKSLVSALIDLQKDSEVPSHVLMGIPHDTNSLPLSPFGEACLRMDLTAIHEVLEKLGYKDDEGAATELSFQMWTNQMQETLNSKKKGDSAFRHKDFKAAIDSYTQFIDVGTMVSPTVYARRSLSYLMNNMPEEALKDALQAQLVSPVWHIASYLQAVALLALGRENEAQGALKEASSLESKKNTN 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1776 521 FunFam probable serine/threonine-protein kinase At5g41260 170 361 - -
Acco11g1776 521 SUPERFAMILY TPR-like 420 516 IPR011990 GO:0005515
Acco11g1776 521 Gene3D Tetratricopeptide repeat domain 410 521 IPR011990 GO:0005515
Acco11g1776 521 ProSiteProfiles Protein kinase domain profile. 93 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1776 521 Gene3D Transferase(Phosphotransferase) domain 1 170 362 - -
Acco11g1776 521 FunFam probable serine/threonine-protein kinase At4g35230 414 521 - -
Acco11g1776 521 FunFam probable serine/threonine-protein kinase At4g35230 65 168 - -
Acco11g1776 521 SUPERFAMILY Protein kinase-like (PK-like) 65 354 IPR011009 -
Acco11g1776 521 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 57 519 IPR045845 GO:0004672|GO:0009742
Acco11g1776 521 Gene3D Phosphorylase Kinase; domain 1 63 168 - -
Acco11g1776 521 Pfam Protein tyrosine and serine/threonine kinase 106 343 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1776 Acco-ChrAcco11 32239553 32246482 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1776 63 344 Glycoside Hydrolase AT3G07070 34.516 1.37e-42 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Acco11g1776 PK_Tyr_Ser-Thr 2.9e-26 CL0016