Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1758 ATGGACTTGAAGTCGTCTCATGTGTCTCCTGTTCTAACTGATCCTGTTCCCGTTAACAAGTCAAGACTAGGAATCCATTCTAGTGTATTTAGTTACTCGCAGCAGGATTCAACCCCTGCTACACCAGGCAAGTGCACAAGAACCGGTTCGAGGAAAGGTGTTGGCAATCTTGATGATGTTCGCTCCAATGGATGGCTAGACGCCATGAAAGCCTCCTCACCCCCGAGGAAGAAGCTGGTTAAGGGTTCTAATACTACTAATACTCAAGTCACTTATTTTGACTCTGACATTGAGGACTATAACTCCTGGATGCGTGATTATCCATCCGCACTGGAGGCTTTTGACAACCTTATTGACCGTGCTAAGGATAAGAAGATTGCCCTGTTTCTAGATTATGACGGAACTCTTTCCCCAATTGTGGATGATCCAGATTCTGCTTTTATGTCCGAAACTATGCGTGCAACGGTGGGAAATGTGGCAAAGTATTTTCCCACGGCAATCATTAGTGGAAGAAGCCGTGATCAGGTTATTGAGTTAGTTAAATTAAGGCAAGTGTACTATGCTGGGAGTCATGGGATGGACATCATTGGCCCTGCCTGCGAAGCTCTGTTCGACAACCATCCAAATTGTGTCAAATCTACTGACCATCAGGGAAAGGAAATAACCGTGTTTCAACCCGCAAAAGAATTCCTGCCTATGATCGACGAGGTTTTTAGAACCCTCGTCGAGATAACTAAAGATATAAAAGGCGCAAAGGTTGAAAATCACAAGTTTTGCGCCTCTGTACATTATCGTAATGTAGATGAGAATAATTGGATAACTGTGGGACAACGCGTCCACGACATGTTAAAAAACTACCCTCGTTTACGTTCAACTCACGGACGCAAGGTTTTAGAGGTACGTCCGGTGATTGATTGGAACAAAGGAAAAGCAGTTGAGTTTTTACTCGAGTCTCTAGGACTGAGTGAGAGGGAAGACGTGATTGCCATATACATAGGAGATGACAAGACAGACGAGGATGCGTTTAAGGTATTGAGGGACAACAAGAGAGGATATGGCATCGTGGTGTCGTCGGTGAGGAAAGAGAGCAATGCCTTTTACTCTCTCAGGGACCCCTCTGACGTCATGAAATTTCTGCAGCTTCTCCTCAACAGCAAGACCCAACAAGACACCCACCAGAAGCAATCCCTCTCTCTTGGCCTTTAA 1206 0.4511 MDLKSSHVSPVLTDPVPVNKSRLGIHSSVFSYSQQDSTPATPGKCTRTGSRKGVGNLDDVRSNGWLDAMKASSPPRKKLVKGSNTTNTQVTYFDSDIEDYNSWMRDYPSALEAFDNLIDRAKDKKIALFLDYDGTLSPIVDDPDSAFMSETMRATVGNVAKYFPTAIISGRSRDQVIELVKLRQVYYAGSHGMDIIGPACEALFDNHPNCVKSTDHQGKEITVFQPAKEFLPMIDEVFRTLVEITKDIKGAKVENHKFCASVHYRNVDENNWITVGQRVHDMLKNYPRLRSTHGRKVLEVRPVIDWNKGKAVEFLLESLGLSEREDVIAIYIGDDKTDEDAFKVLRDNKRGYGIVVSSVRKESNAFYSLRDPSDVMKFLQLLLNSKTQQDTHQKQSLSLGL 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1758 401 MobiDBLite consensus disorder prediction 33 59 - -
Acco11g1758 401 NCBIfam HAD-IIB family hydrolase 128 346 IPR006379 -
Acco11g1758 401 Pfam Trehalose-phosphatase 129 373 IPR003337 GO:0003824|GO:0005992
Acco11g1758 401 FunFam Trehalose 6-phosphate phosphatase 227 303 - -
Acco11g1758 401 Gene3D - 126 209 IPR023214 -
Acco11g1758 401 Gene3D - 225 397 IPR023214 -
Acco11g1758 401 FunFam Trehalose 6-phosphate phosphatase 233 392 - -
Acco11g1758 401 CDD HAD_TPP 127 377 - -
Acco11g1758 401 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 40 394 IPR044651 GO:0004805|GO:0005992
Acco11g1758 401 NCBIfam trehalose-phosphatase 124 383 IPR003337 GO:0003824|GO:0005992
Acco11g1758 401 SUPERFAMILY HAD-like 127 383 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1758 Acco-ChrAcco11 31981765 31983723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1758 122 382 Trehalose Biosynthesis Gene Families AT1G70290 26.812 1.08e-10 61.6