Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1753 ATGTCATCATCCTCTTCCACTACCTTATCGCTGGACCACCTCCCTCCTTCCGAGCAGCTTTGTTATGTCCACTGCAACATTTGTGACACTGTCCTCGCTGTGTGTGTTCCTTGCACCAGCTTGTTCAAGACTGTGACGGTGCGATGCGGCCATTGCACCAATCTGCTGCCAGTTAACGTTAACGTTAACGTGCGTGGATTGCTTCTTCCTTCAGCGAACCAGTTTCACTTGGGTCACTCTTTCTACTCTCCATCTCACAATCTTCTGGAGGAGATACCAAACCCATCCCCAAATTTCTTAATCAATCAGACCAACTCTTCCAATGACTTCTCTATACCTTCAAGGACAACACCTAGTGAGCTTCCACGCCCACCCCTCATCAATAGACCTCCTGAGAAGAGACAGAGAGTCCCCTCCGCCTACAACCGATTCATTAAGGAGGAGATCCAACGCATCAAATCTATCAATCCCGATATAACCCACAGAGAAGCCTTCAGTGCAGCTGCCAAGAACTGGGCCCACTTCCCTCACATTCACTTCGGCCTCATGCCTGATCAGACCATGAAGAAGACAAATGTGCGGCAGCAGGAAGGAGAGGACGTTGTCCATATGAAAGATAATGGGTATTTTGCTTCTGCAAATGTTGGTGTTTCTCCCTACTAG 663 0.4857 MSSSSSTTLSLDHLPPSEQLCYVHCNICDTVLAVCVPCTSLFKTVTVRCGHCTNLLPVNVNVNVRGLLLPSANQFHLGHSFYSPSHNLLEEIPNPSPNFLINQTNSSNDFSIPSRTTPSELPRPPLINRPPEKRQRVPSAYNRFIKEEIQRIKSINPDITHREAFSAAAKNWAHFPHIHFGLMPDQTMKKTNVRQQEGEDVVHMKDNGYFASANVGVSPY 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1753 220 PANTHER PROTEIN YABBY 6-RELATED 1 194 IPR006780 GO:0007275
Acco11g1753 220 MobiDBLite consensus disorder prediction 103 134 - -
Acco11g1753 220 MobiDBLite consensus disorder prediction 103 117 - -
Acco11g1753 220 CDD HMG-box_SF 136 172 - -
Acco11g1753 220 Gene3D High mobility group box domain 127 200 IPR036910 -
Acco11g1753 220 FunFam Axial regulator YABBY 127 198 - -
Acco11g1753 220 Pfam YABBY protein 16 182 IPR006780 GO:0007275
Acco11g1753 220 SUPERFAMILY HMG-box 125 175 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1753 Acco-ChrAcco11 31932853 31935356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1753 27 218 C2C2-YABBY Transcription Factor Family AT4G00180 57.346 6.29e-63 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Acco11g1753 YABBY 7.8e-68 CL0114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1753 11 31932853 31935356 Acco11g1753 11 31932853 31935356 ECH