Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1748 ATGGGGAGACAACCTTGCTGTGACAAACTGGGCGTGAAAAAAGGACCTTGGACTGCTGAGGAAGACAAGAAGCTTATTAACTTCATTCTCACCAATGGCCAGTGCTGTTGGCGGGCCGTCCCCAAGCTCGCCGGCCTTCGTCGTTGCGGTAAGAGTTGCCGCCTTCGTTGGACTAATTATCTCCGTCCCGACTTGAAGAGAGGACTTCTCACTGAAGCTGAAGAGCAGCTCGTTATCGATCTCCATGCCCGTCTTGGCAACAGGTGGTCCAAGATTGCTGCCAGATTACCTGGAAGGACAGACAATGAGATTAAGAATCACTGGAACACACACATCAAGAAAAAGCTGCTTAAGATGGGTATTGATCCTGTTACTCATGAACCTCTTAATAAACAGGATGCCTCCCAGGAAACAACAACAACTTCCCATCAGAATAATCCACAATCTGCAAATAATCATCAGCTCATGAAGGAAAACGAGAGGGTTCCGAATTCTGGGGAGAATTCGAGTACGTCCCCTGTTGAAAACTCCTCTTCTGGGGACGAGTCCCTTATGCTAGACAGTATCTGCAGCGACGAGTCTCTAATGAACAGCTTGTGGCTGGACGAAACACCACTGGCGGATGCATTATGGGACAGTGAACCTAAAGTGCAGAATCCTGCTAGTAATAATAATCACATGGCCATGCCATTTTGGGAGGACAACTGTGCTTGGCTTTTGGACTGTCAGGACTTTGGTATTCATGATTTTGGCGGTTTTAATTGTTTTAATGAGTTTGAGTCAAATTCACTGCAAACTTTAGGAATCGAGGAAAAGGATCATTAG 825 0.4642 MGRQPCCDKLGVKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLTEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKMGIDPVTHEPLNKQDASQETTTTSHQNNPQSANNHQLMKENERVPNSGENSSTSPVENSSSGDESLMLDSICSDESLMNSLWLDETPLADALWDSEPKVQNPASNNNHMAMPFWEDNCAWLLDCQDFGIHDFGGFNCFNEFESNSLQTLGIEEKDH 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1748 274 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Acco11g1748 274 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Acco11g1748 274 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Acco11g1748 274 FunFam MYB transcription factor 70 148 - -
Acco11g1748 274 CDD SANT 16 61 IPR001005 -
Acco11g1748 274 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Acco11g1748 274 MobiDBLite consensus disorder prediction 125 183 - -
Acco11g1748 274 PANTHER F14D16.11-RELATED 1 179 - -
Acco11g1748 274 FunFam MYB transcription factor 11 67 - -
Acco11g1748 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Acco11g1748 274 MobiDBLite consensus disorder prediction 129 183 - -
Acco11g1748 274 CDD SANT 71 112 IPR001005 -
Acco11g1748 274 SMART sant 13 63 IPR001005 -
Acco11g1748 274 SMART sant 66 114 IPR001005 -
Acco11g1748 274 Gene3D - 71 157 - -
Acco11g1748 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Acco11g1748 274 Gene3D - 12 67 - -
Acco11g1748 274 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1748 Acco-ChrAcco11 31875106 31876482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1748 1 251 MYB Transcription Factor Family AT4G22680 59.925 3.89e-101 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco11g1748 Myb_DNA-binding 2.9e-13 CL0123