Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1732 ATGCATGAGTTGTTAAGCTTTTTAAATATGGAATCAAGGGATGGAATTAGCAGCGCAGTCACGGTGGTGGGATCAGATGATCCGTCGGAGTACCATGTAGCTCCCCGGACCGAGAACCCAGCAGCCACCGGCGGATCGACGACGACGTCTGCGCTGGCTCCGGCGGCTCAAGGGAGTGCTCCTCCGACGCAGACAGCGCCGGTGGGAGGCACGCCGGCAACCATGACGATGCCCGGGAAGAAGAAAAGAGGGCGACCGAGAAAGTACGGACCAGACGGGTCGGTGACGATGGCTCTATCTCCTAAACCAATATCTTCTTCGGCTCCCCCACAAGTCATCGATTTCTCCGCAGATAAGCGCGGGAAAGTTCGTCCAGCTAGTTCGGTCAGCAAATCCAAATTCGAGGTCGAAAATTTAGGTGAATGGGTTGCATGCTCCGTAGGTGCTAATTTTACACCACATATAATCACTGTTAATGCTGGGGAGGATGTTACTATGAAGATAATATCATTTTCTCAGCAAGGACCTCGAGCTATATGTATTCTTTCTGCAAATGGTGTCATATCAAGTGTCACACTTCGTCAACCTGATTCTTCTGGCGGCACATTGACTTATGAGGGACGTTTTGAAATTCTGTCGTTGTCTGGATCCTTCATGCCAAGTGAAAGTGGGGGAACACGGAGCAGATCCGGGGGCATGAGCGTTTCTTTGGCAAGTCCCGATGGTCGTGTTGTAGGCGGTGGAGTGGCAGGTCTATTAGTAGCAGCAAGTCCTGTGCAGGTAGTGGTAGGAAGCTTTCTGGCTGGAAACCAGCACGAGCAAAAGCCAAAGAAACAGAAAATTGAAGTGATATCCACAGCCATACCAACTGCTGTTGTTCCCTTGTCTAGTGTTACGGATCCCGTCCCTCTCCTCACCTCTCCGTCTTCCTTTCGTGGCGACAGTTGGTCTGCAATCCCGGCTGATAACAGGAATAACACCACCAGCACCAACGTCAACGCCAACAATAATAGTAATAGTAATAATACTAATAATAAGCCGACTGATATTAATGTGTCACCGTCTGGAGGGTAA 1074 0.5009 MHELLSFLNMESRDGISSAVTVVGSDDPSEYHVAPRTENPAATGGSTTTSALAPAAQGSAPPTQTAPVGGTPATMTMPGKKKRGRPRKYGPDGSVTMALSPKPISSSAPPQVIDFSADKRGKVRPASSVSKSKFEVENLGEWVACSVGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSESGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHEQKPKKQKIEVISTAIPTAVVPLSSVTDPVPLLTSPSSFRGDSWSAIPADNRNNTTSTNVNANNNSNSNNTNNKPTDINVSPSGG 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1732 357 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 49 343 IPR039605 GO:0003680
Acco11g1732 357 ProSiteProfiles PPC domain profile profile. 148 287 IPR005175 -
Acco11g1732 357 CDD DUF296 152 243 IPR005175 -
Acco11g1732 357 MobiDBLite consensus disorder prediction 20 92 - -
Acco11g1732 357 SUPERFAMILY AF0104/ALDC/Ptd012-like 150 270 - -
Acco11g1732 357 MobiDBLite consensus disorder prediction 309 357 - -
Acco11g1732 357 MobiDBLite consensus disorder prediction 40 71 - -
Acco11g1732 357 Gene3D - 153 286 - -
Acco11g1732 357 FunFam AT-hook motif nuclear-localized protein 1-like 153 283 - -
Acco11g1732 357 Pfam Plants and Prokaryotes Conserved (PCC) domain 153 266 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1732 Acco-ChrAcco11 31740262 31744010 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1732 8 352 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 59.299 2.00e-125 363