Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1727 ATGGATCCAATAGCAGGGCATGGGCATGGGCATGGGCAGTCACTTCCCCCACCATTTCATATGCACCACCAGCAGCAATCTCATCAATTTCAGTCACTACACCAAAACACAGAAGACGAACAAAGCGCAAGTAGCAGTTGCCTGAACCTCACCGCCGGCAAGAGAGAACGCGAAGAACAAACCAGCAACAACAACATCAATACCGATCAAGGCAATAATATGAACAACGGAGTAGAAGGTGGAGAAATCACGAGAAGGTCTCGTGGAAGACCCTCCGGATCCAAGAACAAACCAAGACCACCCATCATCATAACCCGAGACAGTGCTAATGCCCTTAGAACCCACGTCATGGAGGTCGCTGACGCTTGTGACATCGTCGAGAGCGTCTCCAGCTTCGCCCGGCGCCGCCAGAGAGGCGTTTGCATTATGAGCGGCACCGGCACCGTTGCTAATGTCACCTTGAGGCAACCAGCTTCATCCGGCGCTGTTGTTTCTCTTCATGGAAGGTTTGAAATCTTGTCGCTCGCCGGCTCCTTCTTACCGCCACCGGCTCCCCTGGCCGCCTCGGGTTTGACCATATATTTGGCTGGCGGACAAGGTCAGGTGGTCGGGGGAACCGTGGTGGGCACGCTTATGGCTTCGGGACCGGTGGTGATCATGGCGGCGTCGTTTAGCAACGCTGCTTATGAGAGGCTTCCTTTGGAGGAAGAAGACCCGTCGGCGGCGATTCAAGGCCCCGGAATCGGTTCGCCGGCCGGAGTTGGTCAGCAGCAGCAACAAATATTTGGGGATGCAACTGGTCCACTCATGCATGCTTTGCCTCCTAATCTTGTCAATTCTATGCAGCCGCCTTCGTCTGATCAACCTTTCTGGGCTCCTGCTCGTCCTCCTTTCGGATGA 900 0.5478 MDPIAGHGHGHGQSLPPPFHMHHQQQSHQFQSLHQNTEDEQSASSSCLNLTAGKREREEQTSNNNINTDQGNNMNNGVEGGEITRRSRGRPSGSKNKPRPPIIITRDSANALRTHVMEVADACDIVESVSSFARRRQRGVCIMSGTGTVANVTLRQPASSGAVVSLHGRFEILSLAGSFLPPPAPLAASGLTIYLAGGQGQVVGGTVVGTLMASGPVVIMAASFSNAAYERLPLEEEDPSAAIQGPGIGSPAGVGQQQQQIFGDATGPLMHALPPNLVNSMQPPSSDQPFWAPARPPFG 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1727 299 CDD DUF296 113 196 IPR005175 -
Acco11g1727 299 FunFam AT-hook motif nuclear-localized protein 112 239 - -
Acco11g1727 299 MobiDBLite consensus disorder prediction 19 51 - -
Acco11g1727 299 Gene3D - 112 241 - -
Acco11g1727 299 MobiDBLite consensus disorder prediction 1 102 - -
Acco11g1727 299 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 39 284 IPR014476 GO:0003680
Acco11g1727 299 PIRSF ESCAROLA 20 298 IPR014476 GO:0003680
Acco11g1727 299 ProSiteProfiles PPC domain profile profile. 109 246 IPR005175 -
Acco11g1727 299 SUPERFAMILY AF0104/ALDC/Ptd012-like 109 238 - -
Acco11g1727 299 MobiDBLite consensus disorder prediction 273 299 - -
Acco11g1727 299 Pfam Plants and Prokaryotes Conserved (PCC) domain 113 226 IPR005175 -
Acco11g1727 299 MobiDBLite consensus disorder prediction 63 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1727 Acco-ChrAcco11 31688456 31689355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1727 1 298 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 51.603 1.99e-80 244