Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1720 ATGAGAAGGCATCGTCAATTTCATCTCCCGCATACTCTCTTGTGCTCTGTTCTTTGTCTTCTTCTTTCGTCCATCACGGTCGTCTCGCCAGTTAGTGAGAAGGAGATTTTGCTTCAATTTAAGGGTAACATTACAGATGATCCTCAAAAGAGCTTGAGCTCATGGGTTTCAAGTGGAAACCCTTGTGAAGATTATAATGGAGTTTTTTGTAATCCAGAAGGTTCTGTTGAAAGAATCGTACTATGGAACACTAGTTTGGCCGGAGTATTGTCGCCGGCTCTTTCAGGGTTGAAATTTTTGAGGATTTTGACACTGTTCGGGAATCATTTTTCCGGGAAGATTCCAGAAGAATATGGCGATATTCACTCATTGTGGAAGATCAATTTGAGCTCCAATGCATTATCTGGTTTAATCCCGGAGTTCATTGGTGACTTAGAAAGTATCCGCTTTCTCGATTTATCCAAAAATGACTTCACTGGGGAGATTCCTTCAGCTTTGTTTAAGCACTGTTACAAAACCAGGTTCATTTCTCTTTCTCATAACAGTCTTTCAGGTACAATTCCAGCGTCATTGGCGAAGTGCTTGAACCTTGAAGGGTTTGATTTTTCATTCAACAACCTAAGGGGGGGTATTCCTTCTGGACTTTGTGATATTCCAAGGTTATCCTATATGTCCCTTAGAAGCAATGCCTTATCAGGAACAGTGAAAGAGCAGATTGTGGGGTGTCAAAGTTTGACACTTTTAGATCTTGGAGATAATATATTCACTGGTTCAGCCCCTTTTAGCATCATTGGAACGAAGAATCTTACTTATTTCAATGTATCTCATAATGGTTTTAGTGGACAAATTCCTGAGATCACTATCTGTAGTGAGAGATTACAAATCTTTGATGCTTCATGGAATGCTTTGGATGGTAAGATTCCCTCTAGTATAACAGGATGCAAGAGCCTCAAGCTAGTGGATGTGGAGTCTAATAGGTTGGAAGGGACTTTCCCATTAGGGATTAAAGATATGGGAAGTCTGCTAGTTATTAAATTAGGTAATAATTCATTAAGTGGGCCGATTCCCAATGGTTTTGGCAACATTCAGATGCTTGAAGTCCTTGATTTGCATAATCTAAACCTTGTCGGCAGAATTCCCGAAGATATAAGCAATTGTAGATTCCTTCTAGAGTTGAATGTTTCAGGTAATAACTTAGAAGGAGAGATTCCTCAGAACCTTAACAACTTAACATATCTTGAAGCCCTTGACCTAAATCAAAATCAGTTTAATGGCAGCATCCCAACAAGCCTAGGAAACTTGTCAAAGATCCAATACCTAGATTTGTCACAAAATTCACTTTCTGGTTCTATCCCTTCTTCCCTTGGGAATTTGAACAACCTGACACATTTTAATCTCTCATCTAACAATCTCTCTGGTGTTATTCCACCTATTAAATCCATACAGATTTTTGGTTCTTCAGCATTTTCCAACAACCCTTATCTTTGTGGTGCTCCTTTGGCCCCTTGCTCAGCAAATGGCACCACAAGACAACCTACCTCTTCTAGGAAGCCTAAACTAAGCGTCTCTGCAATTATTGCAATTGTTGCTGCAGCAGTGATTCTTATTGGGGTTTGTTTGGTTAGCATCATGAACATCAAGGCACGTAGTAGTAAGAGAAAAGAGGAACAGATGATGATTGTTGAGAGTACACCCCTTGGATCTACAGAATCAAATGTTATAATAGGAAAGCTGGTTCTCTTCAGTAAAAGTTTACCATCCAAGTATGAAGACTGGGAGTCAGGCACCAAAGCATTGCTCGACAAGGAGTCTCTGATCGGGCGTGGATCGATCGGGACAGTCTACAGAACTGATTTTGAAGGTGGGATCTCAATTGCAGTGAAAAAGCTTGAGACTTTGGGAAGAATCAGAAACCAAGATGAATTTGAGCATGAAATTGGGCGAATAAGTAACCTTCAACACCCTAATTTAGTAGCCATTCAAGGTTACTATTGGTCCTCCACAATGCAGTTGATTCTATCAGAGTTTGTCTCAAATGGGAATCTCTACGAAAATCTACACGGGTTCGGCTATCCCGGAACCAGCACTAGCCGCGGCAACCAGGAACTAAATTGGTCTAGAAGGTATCAAATTGCAGTTGGAACTGCAAGTGCCCTTGCCTACCTTCACCATGATTGTCGACCTCCAATTCTTCATCTCAATATAAAGTCCTCAAACATACTCCTAGATGACAAGTACGAGGCAAAGTTGTGTGATTACGGATTAGAGAAGTTACTTCCCATTTTGGACAATTATGGTTTGACCAAATTCCACAATTCTGTTGGGTATGTTGCACCAGAGCTGGCTCAGGGTATGAGACACAGTGAGAAATGTGATGTGTATAGTTTTGGGGTTATTCTTTTGGAGTTGGTCACAGGGAGGAAGCCAGTAGAAAGTCCAACAGCGAGCGAGGTTGTGGTTTTGTGTGAATATGTAAGAGGGTTATTGGAGACAGGATCAGCTTCACTATGCTTTGATCCGAGGTTGCTGGGTTTTTCAGAGAATGAGTTAATTCAGGTGATGAGATTGGGGCTTATTTGTACGGCAGAGGATGCTTCAAGGAGACCAAGTATGGCTGAGGTTGTGCAGGTTCTTGAATCTATCAGAAATGGATTGGAATCAAATTAA 2667 0.4098 MRRHRQFHLPHTLLCSVLCLLLSSITVVSPVSEKEILLQFKGNITDDPQKSLSSWVSSGNPCEDYNGVFCNPEGSVERIVLWNTSLAGVLSPALSGLKFLRILTLFGNHFSGKIPEEYGDIHSLWKINLSSNALSGLIPEFIGDLESIRFLDLSKNDFTGEIPSALFKHCYKTRFISLSHNSLSGTIPASLAKCLNLEGFDFSFNNLRGGIPSGLCDIPRLSYMSLRSNALSGTVKEQIVGCQSLTLLDLGDNIFTGSAPFSIIGTKNLTYFNVSHNGFSGQIPEITICSERLQIFDASWNALDGKIPSSITGCKSLKLVDVESNRLEGTFPLGIKDMGSLLVIKLGNNSLSGPIPNGFGNIQMLEVLDLHNLNLVGRIPEDISNCRFLLELNVSGNNLEGEIPQNLNNLTYLEALDLNQNQFNGSIPTSLGNLSKIQYLDLSQNSLSGSIPSSLGNLNNLTHFNLSSNNLSGVIPPIKSIQIFGSSAFSNNPYLCGAPLAPCSANGTTRQPTSSRKPKLSVSAIIAIVAAAVILIGVCLVSIMNIKARSSKRKEEQMMIVESTPLGSTESNVIIGKLVLFSKSLPSKYEDWESGTKALLDKESLIGRGSIGTVYRTDFEGGISIAVKKLETLGRIRNQDEFEHEIGRISNLQHPNLVAIQGYYWSSTMQLILSEFVSNGNLYENLHGFGYPGTSTSRGNQELNWSRRYQIAVGTASALAYLHHDCRPPILHLNIKSSNILLDDKYEAKLCDYGLEKLLPILDNYGLTKFHNSVGYVAPELAQGMRHSEKCDVYSFGVILLELVTGRKPVESPTASEVVVLCEYVRGLLETGSASLCFDPRLLGFSENELIQVMRLGLICTAEDASRRPSMAEVVQVLESIRNGLESN 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1720 888 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Acco11g1720 888 Gene3D Ribonuclease Inhibitor 221 507 IPR032675 -
Acco11g1720 888 SUPERFAMILY Protein kinase-like (PK-like) 601 879 IPR011009 -
Acco11g1720 888 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 175 878 - -
Acco11g1720 888 FunFam Putative LRR receptor-like serine/threonine-protein kinase 577 676 - -
Acco11g1720 888 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g12460 169 506 - -
Acco11g1720 888 FunFam Putative LRR receptor-like serine/threonine-protein kinase 678 885 - -
Acco11g1720 888 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g12460 30 168 - -
Acco11g1720 888 CDD STKc_IRAK 606 881 - -
Acco11g1720 888 Gene3D Ribonuclease Inhibitor 146 218 IPR032675 -
Acco11g1720 888 Gene3D Ribonuclease Inhibitor 32 145 IPR032675 -
Acco11g1720 888 Pfam Protein kinase domain 602 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1720 888 Gene3D Phosphorylase Kinase; domain 1 570 676 - -
Acco11g1720 888 ProSiteProfiles Protein kinase domain profile. 600 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1720 888 SUPERFAMILY L domain-like 168 504 - -
Acco11g1720 888 SUPERFAMILY L domain-like 75 164 - -
Acco11g1720 888 Gene3D Transferase(Phosphotransferase) domain 1 677 887 - -
Acco11g1720 888 Pfam Leucine rich repeat 412 471 IPR001611 GO:0005515
Acco11g1720 888 Pfam Leucine Rich repeat 385 402 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1720 Acco-ChrAcco11 31647132 31649893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1720 29 887 Receptor kinase-like Gene Family AT1G62950 64.943 0.0 1085
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Acco11g1720 Pkinase 1.3e-35 CL0016