Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1691 ATGACGTCGTCTCAGGAGCATGAGATGGATCAGGACGATGATGGAGGTACCTCTGACCTCAGCACCAGCGCCGGCGATCCTGGGGCCATCAACACCGACAAAAACAATGGACTTTCCAAAGAACCTGTCTCGGACGATCCCTTGGCTTTCCAGGTCTTGCCGTTGAAGGAGGAGCCTGTTGATTCGGACTCACCGTCAGACCAGGAACAAAAATCGCAGCCTTCCTCGTCGGCTCCGATTGGAGTCGTTCCTCTCGCGATGCAGATGCAAATGCCCCTAACTATGTCCATGCCCATGCCAGACGCTACCGCGAGACGCTCCTCCACCAAGGACCGCCACACGAAGGTGGAAGGCCGTGGACGTAGGATCCGAATACCCGCAACTTGCGCGGCTCGGATCTTTCAGCTGACTCGGGAATTAGGTCATAAGTCTGATGGCGAAACCGTAAGGTGGCTCCTCGAACACGCGGAGCAGGCCATCATCGAGGCCACCGGTACAGGCACCGTCCCAGCCATCGCTGTCTCCGTCGGGGGAACTCTGAAGATTCCTACAACGTCTAGTGCCCACAGCAATCCGGACTCGGAACTCAGGAAGAAGCGGAAAAGGCCGTCCAATAGTGAGTTTGTGGACGTGGGTGAAACCGTTTCACAATCATCCGGTTTGGCCTCGGTTCAACCAGCTCTTCCGCAGGGCCTTGTGCCTGTGTGGGCAGTGGGCAACACTAATATGATGATCCCGGCGAACGCCTTTTGGATGATCCCTCCAGGGACAACGGCGACGCCAGTGGGCGGAACTCCGGGATCGTCAAACCAACAACCTCAGATATGGACTTTGTCGCCGACGGTGACGCCCATATTCAACGTGTCCGCCAGGCCCGTATCATCTTTGTTGGAAACAACGAATACCTCGGGCGGCATAGAAGCGTCGCCGTCGGGATGCAACAATTCGTCTAACTCAGCGGCGGTGAGCACGAGCACGGTGGGGCCAAGGGCGGCGAAGAAATCGACGATGGCACCGAGCGTAGTGACGGGCAGCAGCAGTAGCAGCGGGAACAAGGCGCAGATGTTAAGGGATTTTTCATTGGAGATTTACGATAAGCAAGAGTTACAGTTGATGGGGCGATCAGAGAACAAGCAAGCATAA 1143 0.5634 MTSSQEHEMDQDDDGGTSDLSTSAGDPGAINTDKNNGLSKEPVSDDPLAFQVLPLKEEPVDSDSPSDQEQKSQPSSSAPIGVVPLAMQMQMPLTMSMPMPDATARRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVSVGGTLKIPTTSSAHSNPDSELRKKRKRPSNSEFVDVGETVSQSSGLASVQPALPQGLVPVWAVGNTNMMIPANAFWMIPPGTTATPVGGTPGSSNQQPQIWTLSPTVTPIFNVSARPVSSLLETTNTSGGIEASPSGCNNSSNSAAVSTSTVGPRAAKKSTMAPSVVTGSSSSSGNKAQMLRDFSLEIYDKQELQLMGRSENKQA 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1691 380 MobiDBLite consensus disorder prediction 301 352 - -
Acco11g1691 380 ProSiteProfiles TCP domain profile. 109 163 IPR017887 -
Acco11g1691 380 MobiDBLite consensus disorder prediction 301 331 - -
Acco11g1691 380 MobiDBLite consensus disorder prediction 97 118 - -
Acco11g1691 380 MobiDBLite consensus disorder prediction 16 38 - -
Acco11g1691 380 MobiDBLite consensus disorder prediction 192 207 - -
Acco11g1691 380 MobiDBLite consensus disorder prediction 338 352 - -
Acco11g1691 380 MobiDBLite consensus disorder prediction 183 208 - -
Acco11g1691 380 MobiDBLite consensus disorder prediction 1 82 - -
Acco11g1691 380 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 65 370 IPR005333 GO:0003700
Acco11g1691 380 Pfam TCP family transcription factor 108 189 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1691 Acco-ChrAcco11 31335239 31336381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1691 91 377 TCP Transcription Factor Family AT2G45680 47.222 9.45e-71 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Acco11g1691 TCP 2.9e-28 No_clan