Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco11g1661 | ATGCCTCAGGGAACCCTTGAAGTCCTCCTGGTCAGTGCCAAAGGCCTCGAGAATACCGATTTTCTCAAAAACATGGATGCTTATGTGATCCTCACCTGCCGTACTCAGGAGCAGAAAAGCGGTGTAGCATCAGGTAAAGGATCTGAGCCGGAATGGAATGAAACCTTTGTTTTCAACTTGACCGGTGACATTTCGGAACTCACATTGAAGATTTTGGACAGTGATGTTGGCTCCAGTGACGATTTCGTCGGAGAAGCAACCATCCCACTTGATGCCCTGTTCACCGAAGGAAGCATCCCTCCTACGGTATACAATGTTGTGAAGGATGAGGAGTATCACGGCGAGATTAAACTTGGCCTCACTTTTACCCCCGAGGGACGCGGCAGCGAATATGTGGAAGAGGAAAACTTAGGTGGATGGAGGGAATCTAGCAGAGACTTCTAA | 444 | 0.4865 | MPQGTLEVLLVSAKGLENTDFLKNMDAYVILTCRTQEQKSGVASGKGSEPEWNETFVFNLTGDISELTLKILDSDVGSSDDFVGEATIPLDALFTEGSIPPTVYNVVKDEEYHGEIKLGLTFTPEGRGSEYVEEENLGGWRESSRDF | 147 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco11g1661 | 147 | ProSiteProfiles | C2 domain profile. | 1 | 103 | IPR000008 | - | |
| Acco11g1661 | 147 | Pfam | C2 domain | 4 | 97 | IPR000008 | - | |
| Acco11g1661 | 147 | PANTHER | C2 DOMAIN-CONTAINING | 1 | 126 | - | - | |
| Acco11g1661 | 147 | Gene3D | C2 domain | 2 | 125 | IPR035892 | - | |
| Acco11g1661 | 147 | SMART | C2_3c | 5 | 102 | IPR000008 | - | |
| Acco11g1661 | 147 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 2 | 125 | IPR035892 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco11g1661 | Acco-ChrAcco11 | 31017107 | 31020553 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco11g1661 | 4 | 119 | C2H2 Transcription Factor Family | AT4G21160 | 27.586 | 8.51e-08 | 48.1 |